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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 14:25:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

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検索語に色がつきます(ミスマッチ挿入欠失

CA00-XX-LV5-017-A09-CB.F Coffea arabica LV5 Coffea arabica cDNA clone CA00-XX-LV5-017-A09-CB, mRNA sequence.
GT697810.1:422-449
AGTATCTCAATTCAACCTACGCGTATTGGA422TGCCTTCTACTCTTCACTCTTCTCCACTGGAACATCAGTGCTCCCCTGCTCGACAACC
CA00-XX-FB1-089-C10-EQ.F Coffea arabica FB1 Coffea arabica cDNA clone CA00-XX-FB1-089-C10-EQ, mRNA sequence.
GT709150.1:459-486
AGTATCTCAATTCAACCTACGCGTATTGGA459TGCCTTCTACTCTTCACTCTTCTCCACTGGAACATCAGTGCTCCCCTGCTCGACAACC
CGN-150 Pericarp Coffea canephora cDNA clone cccp16k5 5', mRNA sequence.
DV663471.1:366-393
GGTTGTCGAGCAGGGGAGCACTGATGTTCC366AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-5745 Pericarp Coffea canephora cDNA clone cccp22e21 5', mRNA sequence.
DV667485.1:572-599
GGTTGTCGAGCAGGGGAGCACTGATGTTCC572AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-13004 Cherry of Early Development Stage Coffea canephora cDNA clone cccs18w1h11 5', mRNA sequence.
DV676611.1:117-144
GGTTGTCGAGCAGGGGAGCACTGATGTTCC117AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAAATGAGATACT
CGN-13467 Cherry of Early Development Stage Coffea canephora cDNA clone cccs18w7e23 5', mRNA sequence.
DV676626.1:380-407
GGTTGTCGAGCAGGGGAGCACTGATGTTCC380AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGGTTGAAATGAGATAC
CGN-19204 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w29b11 5', mRNA sequence.
DV680517.1:562-589
GGTTGTCGAGCAGGGGAGCACTGATGTTCC562AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGAATAC
CGN-21831 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w22h5 5', mRNA sequence.
DV682165.1:573-600
GGTTGTCGAGCAGGGGAGCACTGATGTTCC573AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-23437 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w27e10 5', mRNA sequence.
DV683176.1:470-497
GGTTGTCGAGCAGGGGAGCACTGATGTTCC470AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-40469 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w12e14 5', mRNA sequence.
DV695564.1:525-552
GGTTGTCGAGCAGGGGAGCACTGATGTTCC525AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-49194 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w25k16 5', mRNA sequence.
DV702754.1:568-595
GGTTGTCGAGCAGGGGAGCACTGATGTTCC568AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-49625 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w25j15 5', mRNA sequence.
DV703121.1:485-512
GGTTGTCGAGCAGGGGAGCACTGATGTTCC485AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-51371 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w2o4 5', mRNA sequence.
DV704552.1:595-622
GGTTGTCGAGCAGGGGAGCACTGATGTTCC595AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-51992 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w10o19 5', mRNA sequence.
DV705042.1:585-612
GGTTGTCGAGCAGGGGAGCACTGATGTTCC585AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-56552 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w13h13 5', mRNA sequence.
DV708510.1:585-612
GGTTGTCGAGCAGGGGAGCACTGATGTTCC585AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-57590 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w19j24 5', mRNA sequence.
DV709319.1:593-620
GGTTGTCGAGCAGGGGAGCACTGATGTTCC593AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-57974 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w18h8 5', mRNA sequence.
DV709623.1:381-408
GGTTGTCGAGCAGGGGAGCACTGATGTTCC381AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CGN-60750 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w25h13 5', mRNA sequence.
DV711844.1:585-612
GGTTGTCGAGCAGGGGAGCACTGATGTTCC585AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CC-L01_046_G05 Coffea young leaves Coffea canephora cDNA clone CC-L01_046_G05, mRNA sequence.
EE194839.1:578-605
GGTTGTCGAGCAGGNGAGCACTGATGTTCC578AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CC-F01_014_C21 Cherry of different development stage Coffea canephora cDNA clone CC-F01_014_C21, mRNA sequence.
EE198867.1:214-241
GGTTGTCGAGCAGGGGAGCACTGATGTTCC214AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CC-F01_018_L14 Cherry of different development stage Coffea canephora cDNA clone CC-F01_018_L14, mRNA sequence.
EE200137.1:520-547
GGTTGTCGAGCAGGGGAGCACTGATGTTCC520AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
TransId-100782 CACAT45FR Coffea arabica cDNA clone CACAT45FR_33_E16_245.F, mRNA sequence.
GR990553.1:16-43
GAGCACTGATGTTCC16AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
TransId-222852 CACATN1 Coffea arabica cDNA clone CACATN1-7543TV, mRNA sequence.
GR995971.1:21-48
CGGCCGGGGACTGATGTTCC21AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
TransId-211412 CACATN1 Coffea arabica cDNA clone CACATN1-3I94TV, mRNA sequence.
GT000919.1:268-295
GGTTGTCGAGCAGGGGAGCACTGATGTTCC268AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
TransId-209916 CACATN1 Coffea arabica cDNA clone CACATN1-3039TV, mRNA sequence.
GT001518.1:90-117
GGTTGTCGAGCAGGGGAGCACTGATGTTCC90AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
TransId-207508 CACATN1 Coffea arabica cDNA clone CACATN1-2705TV, mRNA sequence.
GT002543.1:551-578
GGTTGTCGAGCAGGGGAGCACTGATGTTCC551AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
TransId-234528 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEWW08TV, mRNA sequence.
GT007192.1:613-640
GGTTGTCGAGCAGGGGAGCACTGATGTTCC613AGTGGAGAAGAGTGAAGAGTAGAAGGCATTCAATACGCGTAGGTTGAATTGAGATACT
TransId-247444 CACAT36FR31 Coffea arabica cDNA clone CACAT36FR31-CAFSM11TV, mRNA sequence.
GT012647.1:171-198
GGTTGTCGAGCAGGGGAGCACTGATGTTCC171AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
TransId-260773 CAHT1343PER Coffea arabica cDNA clone CAHT1343PER-CAHTE57TV, mRNA sequence.
GT016573.1:602-629
GGTTGTCGAGCAGGGGAGCACTGATGTTCC602AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
TransId-279097 CarCatBudEnri2 Coffea arabica cDNA clone CarCatBudEnri2_57-D10-PAL17d, mRNA sequence.
GT020183.1:608-635
GGTTGTCGAGCAGGGGAGCACTGATGTTCC608AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-CL2-067-H06-EQ.F Coffea arabica CL2 Coffea arabica cDNA clone CA00-XX-CL2-067-H06-EQ, mRNA sequence.
GT676251.1:145-172
GGTTGTCGAGCAGGGGAGCACTGATGTTCC145AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-CA1-007-H10-BG.F Coffea arabica CA1 Coffea arabica cDNA clone CA00-XX-CA1-007-H10-BG, mRNA sequence.
GT688530.1:552-579
GGTTGTCGAGCAGGGGAGCACTGATGTTCC552AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-CA1-043-C10-MC.F Coffea arabica CA1 Coffea arabica cDNA clone CA00-XX-CA1-043-C10-MC, mRNA sequence.
GT688531.1:491-518
GGTTGTCGAGCAGGGGAGCACTGATGTTCC491AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-FB2-040-A10-AB.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-040-A10-AB, mRNA sequence.
GT703883.1:584-611
GGTTGTCGAGCAGGGGAGCACTGATGTTCC584AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTG
CA00-XX-FB2-016-H07-BM.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-016-H07-BM, mRNA sequence.
GT703884.1:529-556
GGTTGTCGAGCAGGGGAGCACTGATGTTCC529AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-FB2-075-D10-CC.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-075-D10-CC, mRNA sequence.
GT703886.1:569-596
GGTTGTCGAGCAGGGGAGCACTGATGTTCC569AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-FB2-007-C10-SB.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-007-C10-SB, mRNA sequence.
GT703887.1:547-574
GGTTGTCGAGCAGGGGAGCACTGATGTTCC547AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-FB2-033-C06-RF.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-033-C06-RF, mRNA sequence.
GT703889.1:578-605
GGTTGTCGAGCAGGGGAGCACTGATGTTCC578AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-FB2-036-F09-BM.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-036-F09-BM, mRNA sequence.
GT703890.1:498-525
GGTTGTCGAGCAGGGGAGCACTGATGTTCC498AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-FB1-045-B06-JM.F Coffea arabica FB1 Coffea arabica cDNA clone CA00-XX-FB1-045-B06-JM, mRNA sequence.
GT709665.1:530-557
GGTTGTCGAGCAGGGGAGCACTGATGTTCC530AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-LV9-032-B05-RF.F Coffea arabica LV9 Coffea arabica cDNA clone CA00-XX-LV9-032-B05-RF, mRNA sequence.
GT711990.1:153-180
GGTTGTCGAGCAGGGGAGCACTGATGTTCC153AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-RX1-043-B10-EB.F Coffea arabica RX1 Coffea arabica cDNA clone CA00-XX-RX1-043-B10-EB, mRNA sequence.
GT730819.1:557-584
GGTTGTCGAGCAGGGGAGCACTGATGTTCC557AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-RX1-051-D05-EB.F Coffea arabica RX1 Coffea arabica cDNA clone CA00-XX-RX1-051-D05-EB, mRNA sequence.
GT730820.1:221-248
GGTTGTCGAGCAGGGGAGCACTGATGTTCC221AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
CA00-XX-IC1-031-H10-EC.F Coffea arabica IC1 Coffea arabica cDNA clone CA00-XX-IC1-031-H10-EC, mRNA sequence.
GT731492.1:256-283
GGTTGTCGAGCAGGGGAGCACTGATGTTCC256AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT
AFP0AAA2YE02FM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO568453.1:556-583
GGTTGTCGAGCAGGGGAGCACTGATGTTCC556AGTGGAGAAGAGTGAAGAGTAGAAGGCATCCAATACGCGTAGGTTGAATTGAGATACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCCTTCTACTCTTCACTCTTCTCCACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCTTCTACTCTTCACTCTTCTCCACT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.500 | 0.492 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCTTCTACTCTTCACTCTTCTCCACT&k=0&no_gap=0&offset=0&limit=50
3.594 | 3.094 | search_minus_done; http://172.18.8.135:50400/match?q=AGTGGAGAAGAGTGAAGAGTAGAAGGCA&k=0&no_gap=0&offset=0&limit=48
3.621 | 0.027 | cgi_end;

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