GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 15:27:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2501443-2501462
GCAAGTATTTGAGCAGCATGCATTCTTGAA2501443TGCTAACGACAGACCACCAAACTACGAGTTACTTAGGAAGAAAATTGTTG
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2622587-2622606
GCAAGTATTTGAGCAGCATGCATTCTTGAA2622587TGCTAACGACAGACCACCAAACTACGAGTTACTTAGGAAGAAAATTGTTG
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2620889-2620908
GCAAGTATTTGAGCAGCATGCATTCTTGAA2620889TGCTAACGACAGACCACCAAACTACGAGTTACTTAGGAAGAAAATTGTTG
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2678308-2678327
GCAAGTATTTGAGCAGCATGCATTCTTGAA2678308TGCTAACGACAGACCACCAAACTACGAGTTACTTAGGAAGAAAATTGTTG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38581817-38581836
CAACAATTTTCTTCCTAAGTAACTCGTAGT38581817TTGGTGGTCTGTCGTTAGCATTCAAGAATGCATGCTGCTCAAATACTTGC
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:38405385-38405404
CAACAATTTTCTCCTTAAGTAACTCGTAGT38405385TTGGTGGTCTGTCGTTAGCATTCAAGAATGCATGCTGCTCAAATACTTGC
Cheilosia variabilis genome assembly, chromosome: 1.
OX579676.1:102391653-102391672
TGACATTCGGCCGGCCGTTCTGAATTTTGA102391653TTGGTGGTCTGTCGTTAGCAACTTTTTTTGTAGCTCACACGTATTCACAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCTAACGACAGACCACCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTAACGACAGACCACCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTAACGACAGACCACCAA&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGTGGTCTGTCGTTAGCA&k=0&no_gap=0&offset=0&limit=46
0.127 | 0.002 | cgi_end;

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