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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:31:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS23011E08 KS23 Capsicum annuum cDNA, mRNA sequence.
GD112009.1:115-134
TTTACAATCATAGCACTATATTTTTCTATA115TGCTATTCCGGCTTGAAATCTTCAGGTCTGCAAAATGACCATGAAGATAT
TSA: Capsicum annuum EJ_MegaContig_25639, mRNA sequence.
JW134213.1:116-135
TTTACAATCATAGCACTATATTTTTCTATA116TGCTATTCCGGCTTGAAATCTTCAGGTCTGCAAAATGACCATGAAGATAT
Sequence 1035 from Patent EP2519097.
JB348623.1:511-530
ATATCTTCATGGTCATTTTGCAGACCTGAA511GATTTCAAGCCGGAATAGCATATAGAAAAATATAGTGCTATGATTGTAAA
Sequence 1035 from patent US 9493785.
KH360535.1:511-530
ATATCTTCATGGTCATTTTGCAGACCTGAA511GATTTCAAGCCGGAATAGCATATAGAAAAATATAGTGCTATGATTGTAAA
Sequence 1035 from Patent EP3056569.
LQ604184.1:511-530
ATATCTTCATGGTCATTTTGCAGACCTGAA511GATTTCAAGCCGGAATAGCATATAGAAAAATATAGTGCTATGATTGTAAA
Sequence 1035 from patent US 10351873.
MO205757.1:511-530
ATATCTTCATGGTCATTTTGCAGACCTGAA511GATTTCAAGCCGGAATAGCATATAGAAAAATATAGTGCTATGATTGTAAA
KS26038H03 KS26 Capsicum annuum cDNA, mRNA sequence.
GD133198.1:383-402
ATATCTTCATGGTCATTTTGCAGACCTGAA383GATTTCAAGCCGGAATAGCATATAGAAAAATATAGTGCTATGATTGTAAA
TSA: Capsicum annuum CM334_CLC_10698, mRNA sequence.
JW113352.1:397-416
ATATCTTCATGGTCATTTTGCAGACCTGAA397GATTTCAAGCCGGAATAGCATATAGAAAAATATAGTGCTATGATTGTAAA
Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:234489004-234489023
ATATCTTCATGGTCATTTTGCAGACCTGAA234489004GATTTCAAGCCGGAATAGCATATAGAAAAATATAGTGCTATGATTGTAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 7.
CP124725.1:237525978-237525997
ATATCTTCATGGTCATTTTGCAGACCTGAA237525978GATTTCAAGCCGGAATAGCATATAGAAAAATATAGTGCTATGATTGTAAA
Sialis fuliginosa genome assembly, chromosome: 1.
OY540809.1:33244745-33244764
AAGCTAGTGGTATTGCCGCACAGCCTGTTG33244745GATTTCAAGCCGGAATAGCATCAGCAAAAGAAAGGATAGCGTTCGTTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTATTCCGGCTTGAAATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTATTCCGGCTTGAAATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.251 | 0.242 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTATTCCGGCTTGAAATC&k=0&no_gap=0&offset=0&limit=50
0.687 | 0.436 | search_minus_done; http://172.18.8.135:50400/match?q=GATTTCAAGCCGGAATAGCA&k=0&no_gap=0&offset=0&limit=48
0.692 | 0.006 | cgi_end;

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