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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:01:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium pratense cDNA clone:RCC11434.
BB938208.1:328-348
GATGAAACCGTCTATGCCTATGGGGAATGG328TGCTCACATGATGTTGAATGGGAATCATCAACAGCTTATGAATGCCATGAA
Trifolium pratense DNA, clone:RCG02121.
DE213809.1:1-21
1TGCTCACATGATGTTGAATGGGAATCACCCACAGTTTATGAATGCCATGAA
Trifolium pratense DNA, clone:RCG03485.
DE214901.1:1-21
1TGCTCACATGATGTTGAATGGGAATCACCCACAGTTTATGAATGCCATGAA
Trifolium pratense DNA, clone:RCG04445.
DE215697.1:1-21
1TGCTCACATGATGTTGAATGGGAATCACCCACAGTTTATGAATGCCATGAA
Trifolium pratense DNA, clone:RCG04548.
DE215778.1:1-21
1TGCTCACATGATGTTGAATGGGAATCACCCACAGTTTATGAATGCCATGAA
Trifolium pratense DNA, clone:RCG01011.
DE246668.1:1-21
1TGCTCACATGATGTTGAATGGGAATCACCCACAGTTTATGAATGCCATGAA
Medicago truncatula, pooled multiple clones, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces.
AC233679.1:4035-4055
GAAACCCCCTTCTATGCCTATGGGGAATGG4035TGCTCACATGATGTTGAATGGTAATCATCCACAGCTTTTGACTGCTATGAA
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:6829382-6829402
GATGAAACCCCCCATGCCTATGGGGAATGG6829382TGCTCACATGATGTTGAATGGGAATCAGCAACAGCTTATGAATGCCATGAA
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:6835366-6835386
GATGAAACCCCCGATGCCTATGGGTAATGG6835366TGCTCACATGATGTTGAATGGGAATCATCCACAACTTATGAAGGGTGCCAA
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:32148635-32148655
GAAACCCAGTATGCCTCCTATGGGGAATGG32148635TGCTCACATGATGTTGAATGGGAATCATCAACAGCTTATGAATGCCATGAA
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:7364247-7364267
GAAACCTCCTAATATGCCTATGGGGAATGG7364247TGCTCACATGATGTTGAATGGAAATCATCCACAGCTTATGAATGCTATGAA
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:7396877-7396897
GAAACCTCCTTCTATGCCTATGGGGAATGG7396877TGCTCACATGATGTTGAATGGAAATCATCCACAGCTTATGAGTGCTATGAA
Trifolium pratense cDNA clone:RCC09144.
BB936236.1:164-184
TTCATGGCATTCATAAACTGTGGGTGATTC164CCATTCAACATCATGTGAGCACCATTCCCCATAGGCATAGAGGGTTTCATC
Trifolium pratense DNA, clone:RCG01978.
DE213697.1:94-114
TTCATGGCATTCATAAACTGTGGGTGATTC94CCATTCAACATCATGTGAGCA
Trifolium pratense DNA, clone:RCG03128.
DE214610.1:143-163
TTCATGGCATTCATAAACTGTGGGTGATTC143CCATTCAACATCATGTGAGCA
Trifolium pratense DNA, clone:RCG03205.
DE214667.1:78-98
TTCATGGCATTCATAAGCTGTTGATGATTC78CCATTCAACATCATGTGAGCACCATTCCCCATAGGCATAGACGGTTTCATC
Trifolium pratense DNA, clone:RCG03488.
DE214903.1:143-163
TTCATGGCATTCATAAACTGTGGGTGATTC143CCATTCAACATCATGTGAGCA
Trifolium pratense DNA, clone:RCG03526.
DE214928.1:143-163
TTCATGGCATTCATAAACTGTGGGTGATTC143CCATTCAACATCATGTGAGCA
Trifolium pratense DNA, clone:RCG03782.
DE215151.1:143-163
TTCATGGCATTCATAAACTGTGGGTGATTC143CCATTCAACATCATGTGAGCA
Trifolium pratense DNA, clone:RCG04353.
DE215624.1:143-163
TACATGGCATTCATAAACTGTGGGTGATTC143CCATTCAACATCATGTGAGCA
Trifolium pratense DNA, clone:RCG01239.
DE246840.1:143-163
TTCATGGCATTCATAAACTGTGGGTGATTC143CCATTCAACATCATGTGAGCA
Trifolium repens isolate ACLI19 chromosome 08_Pall.
CP125851.1:49720889-49720909
TTCATGGCATTCATAAGCTGTGGATGATTC49720889CCATTCAACATCATGTGAGCACCATTCCCCATAGGCATAGGGTGTTTCATC
Medicago arabica genome assembly, chromosome: 5.
OX326968.1:54387425-54387445
TTCATAGCACTCATAAGCTGTGGATGATTC54387425CCATTCAACATCATGTGAGCACCATTCCCCATAGGCATAGAAGGGGGTTTC
Medicago arabica genome assembly, chromosome: 5.
OX326968.1:54419211-54419231
TTCATAGCACTCATAAGCTGTGGATGATTC54419211CCATTCAACATCATGTGAGCACCATTCCCCATAGGCATAGAAGGGGGTTTC
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:32173867-32173887
TTCATGGCATTCATAAGCTGTTGATGATTC32173867CCATTCAACATCATGTGAGCACCATTCCCCATAGGAGGCATACTGGGTTTC
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:55292772-55292792
TTCATGGCATTCATAAGCTGTGGATGATTT55292772CCATTCAACATCATGTGAGCACCATTCCCCATAGGCATTTGGGGTTTCATC
Tridacna gigas genome assembly, chromosome: 5.
OX244032.2:56872340-56872360
ACTTTCTCCTTTTCCCTTAATGTTTTCTAC56872340CCATTCAACATCATGTGAGCAACATCTGCAAATGCTTTCCATTTGAATAAC
Sepia lycidas genome assembly, chromosome: 27.
OZ010597.1:29753754-29753774
TTCATCAACCTGTTATGAGGGCCTGCAAAA29753754CCATTCAACATCATGTGAGCATATTTGAAAGGGCCCGCCAATCAATGATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTCACATGATGTTGAATGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTCACATGATGTTGAATGG | format : html | download : | debug :

0.012 | 0.012 | search_start;
0.307 | 0.295 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTCACATGATGTTGAATGG&k=0&no_gap=0&offset=0&limit=50
0.605 | 0.297 | search_minus_done; http://172.18.8.135:50400/match?q=CCATTCAACATCATGTGAGCA&k=0&no_gap=0&offset=0&limit=38
0.616 | 0.011 | cgi_end;

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