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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-15 17:57:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys arenicola genome assembly, chromosome: 5.
OX460351.1:123082493-123082512
GCCACCTGCTAGGCAGATAGAAACAGACCC123082493TGCTGAGGTTCAGGTGAGTGTTCAATCCTCATCAGAGACTCCCGGCTCAG
Onychomys leucogaster genome assembly, chromosome: 5.
OX460375.1:124144680-124144699
GCCACCTGCTAGGCAGATAGAAACAGACCC124144680TGCTGAGGTTCAGGTGAGTGTTCAATCCTCATCAGAGACTCCTGGCTCAG
Onychomys leucogaster genome assembly, chromosome: 5.
OX460422.1:124582142-124582161
GCCACCTGCTAGGCAGATAGAAACAGACCC124582142TGCTGAGGTTCAGGTGAGTGTTCAATCCTCATCAGAGACTCCTGGCTCAG
Onychomys arenicola genome assembly, chromosome: 5.
OX460446.1:123036176-123036195
GCCACCTGCTAGGCAGATAGAAACAGACCC123036176TGCTGAGGTTCAGGTGAGTGTTCAATCCTCATCAGAGACTCCCGGCTCAG
Heterocephalus glaber genome assembly, chromosome: 2.
OZ001067.1:38912812-38912831
GACAAAGGCTGAGGGTTGGTCCTGAGGTGT38912812TGCTGAGGTTCAGGTGAGTGGTCCAGTAGCCCTGCTGTACTATCTGTATG
Hyperoodon ampullatus genome assembly, chromosome: X.
OX457055.1:113365199-113365218
ATATGTCCAAAGAGTCTAGAGAGTTTAGAT113365199TGCTGAGGTTCAGGTGAGTGGGATGATGCATTTTTTGGTTAAGCAGCTTG
Balaenoptera acutorostrata genome assembly, chromosome: X.
OX465355.1:114018270-114018289
ATATGTCCAAAGAGTCTAGAGAGTTTAGAT114018270TGCTGAGGTTCAGGTGAGTGGGATGATGTATTTTGTGGTTAAGCAGCTTG
Phocoena phocoena genome assembly, chromosome: X.
OZ004762.1:110628745-110628764
ATATGTACAAAGAGTCTAGAGAGTTTAGAT110628745TGCTGAGGTTCAGGTGAGTGGGATGATGCATTTTGTGGTTAAGCAGCTTG
Heterocephalus glaber genome assembly, chromosome: 2.
OX090910.1:15153631-15153650
CATACAGATAGTACAGCAGGGCTACTGGAC15153631CACTCACCTGAACCTCAGCAACACCTCAGGACCAACCCTCAGCCTTTGTC
Heterocephalus glaber genome assembly, chromosome: 2.
OX090942.1:1491403-1491422
CATACAGATAGTACAGCAGGGCTACTGGAC1491403CACTCACCTGAACCTCAGCAACACCTCAGGACCAACCCTCAGCCTTTGTC
Peromyscus eremicus genome assembly, chromosome: 5.
OX460398.1:14631680-14631699
CTGAGCCAGGAGTCTCTGATGAGGATTGAA14631680CACTCACCTGAACCTCAGCAGGGTCTGTTTCTATTTGCCTAGCAGGTGGC
Peromyscus eremicus genome assembly, chromosome: 5.
OX460470.1:14565676-14565695
CTGAGCCAGGAGTCTCTGATGAGGATTGAA14565676CACTCACCTGAACCTCAGCAGGGTCTGTTTCTATTTGCCTAGCAGGTGGC
Heterocephalus glaber genome assembly, chromosome: 2.
OZ001110.1:41553329-41553348
CATACAGATAGTACAGCAGGGCTACTGGAC41553329CACTCACCTGAACCTCAGCAACACCTCAGGACCAACCCTCAGCCTTTGTC
Somateria mollissima genome assembly, chromosome: 1.
OX598302.1:87963655-87963674
CAATTAATTTGAACTTTTATAGGATGAGTT87963655CACTCACCTGAACCTCAGCAGAGAGATGGGGCTTTCTTCCACAGCCCACA
Somateria mollissima genome assembly, chromosome: 1.
OX598690.1:89626651-89626670
CAATTAATTTGAACTTTTATAGGATGAGTT89626651CACTCACCTGAACCTCAGCAGAGAGATGGGGCTTTCTTCCACAGCCCACA
UDP96-008 AC- and AG-enriched peach leaf genomic libraries Prunus persica STS genomic clone peach-ac 46, sequence tagged site.
BV079692.1:163-182
ACACAGAGAGAAACAGAGATCAGTAAACAA163CACTCACCTGAACCTCAGCATCACTCTTCTCAACCTCAAGACAAATATCT
Prunus avium clone UDP96-008 microsatellite sequence.
AF501740.1:114-133
ACACACAGAGAAACAGAGATTAGTCAACAA114CACTCACCTGAACCTCAGCA
Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:18105638-18105657
ACACACAGAGAAACAGAGATTAGTAAACAA18105638CACTCACCTGAACCTCAGCATCACTCTTCTCAACCTCAAGACAAATATCT
Buxus sempervirens genome assembly, chromosome: 5.
OX387186.1:3246557-3246576
TACAGATTATGAACCAAAAAATTAAAAAAA3246557CACTCACCTGAACCTCAGCATCATTCTTCTCATCCTCTACAGAAATATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTGAGGTTCAGGTGAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTGAGGTTCAGGTGAGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.220 | 0.212 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTGAGGTTCAGGTGAGTG&k=0&no_gap=0&offset=0&limit=50
0.339 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=CACTCACCTGAACCTCAGCA&k=0&no_gap=0&offset=0&limit=42
0.346 | 0.007 | cgi_end;

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