GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:02:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pollachius pollachius genome assembly, chromosome: 13.
OX465136.1:6518699-6518718
ACCCCGGCCATGTGATTCAGACTCATAGCG6518699TGCTGTGCCATCTTGATCTCCACAAGCACTGCCTAAAAGAGGAATAAAGT
JP 2018500270-A/4: COMPOSITIONS COMPRISING BACTERIAL STRAINS.
MA128924.1:2030760-2030779
AATTCGGCTGCCTTCTCCAGATCGTACTTC2030760TGCTGTGCCATCTTGATCTCATTCTTGACCGCTTCGATCTCCTCACGCAG
JP 2019031541-A/4: COMPOSITIONS COMPRISING BACTERIAL STRAINS.
MD402949.1:2030760-2030779
AATTCGGCTGCCTTCTCCAGATCGTACTTC2030760TGCTGTGCCATCTTGATCTCATTCTTGACCGCTTCGATCTCCTCACGCAG
Sequence 4 from patent US 10500237.
MO564391.1:2030760-2030779
AATTCGGCTGCCTTCTCCAGATCGTACTTC2030760TGCTGTGCCATCTTGATCTCATTCTTGACCGCTTCGATCTCCTCACGCAG
Sequence 4 from patent US 11123379.
MY537557.1:2030760-2030779
AATTCGGCTGCCTTCTCCAGATCGTACTTC2030760TGCTGTGCCATCTTGATCTCATTCTTGACCGCTTCGATCTCCTCACGCAG
Sequence 4 from patent US 11273185.
MY913839.1:2030760-2030779
AATTCGGCTGCCTTCTCCAGATCGTACTTC2030760TGCTGTGCCATCTTGATCTCATTCTTGACCGCTTCGATCTCCTCACGCAG
Roseburia hominis strain OB EAV1 11 DCM chromosome, complete genome.
CP117966.1:2368783-2368802
AATTCGGCTGCCTTCTCCAGATCGTACTTC2368783TGCTGTGCCATCTTGATCTCATTCTTGACCGCTTCGATCTCCTCACGCAG
Stelis phaeoptera genome assembly, chromosome: 16.
OX030945.1:1964643-1964662
CTTATCTGAACGCGATGTCGAAGCGATAAA1964643TGCTGTGCCATCTTGATCTCCTATAAATTATTCAGGTTGAAAATAAAATA
Arvicola amphibius genome assembly, chromosome: 7.
LR862386.1:68093568-68093587
GTACTTGTGGAGGTGAGGCCTAAAGATGGA68093568GAGATCAAGATGGCACAGCAAGTCAAGGCATTGCCTTTGCTGCCAAAGCT
Chionomys nivalis genome assembly, chromosome: 10.
OX465458.1:14438844-14438863
CGGTACTTGGAGGTGAGGCCTGAAGATGGA14438844GAGATCAAGATGGCACAGCAAGTCAAGGCATTGCCTTTGCTGCCAAAGCT
SM_A0436 Suidasia medanensis cDNA library Suidasia medanensis cDNA, mRNA sequence.
CN738194.1:515-534
AAACCTAGAAGCGACGAGTCTAGTGCAGAG515GAGATCAAGATGGCACAGCAGGTGACTGGCACTATTCTCCCGATTGTGAA
SM_A1210 Suidasia medanensis cDNA library Suidasia medanensis cDNA, mRNA sequence.
CN738887.1:491-510
AAACCTAGAAGCGACGAGTCTAGTGCAGAG491GAGATCAAGATGGCACAGCAGGTGACTGGCACTATTCTCCCGATTGTGAA
SM_ASB287 Suidasia medanensis cDNA library Suidasia medanensis cDNA, mRNA sequence.
CN739400.1:430-449
AAACCTAGAAGCGACGAGTCTAGTGCAGAG430GAGATCAAGATGGCACAGCAGGTGACTGGCACTATTCTCCCGATTGTGAA
Roseburia hominis A2-183, complete genome.
CP003040.1:781785-781804
CTGCGTGAGGAGATCGAAGCGGTCAAGAAT781785GAGATCAAGATGGCACAGCAGAAGTACGATCTGGAGAAGGCAGCCGAATT
Roseburia hominis isolate MGYG-HGUT-02517 genome assembly, chromosome: 1.
LR699011.1:781785-781804
CTGCGTGAGGAGATCGAAGCGGTCAAGAAT781785GAGATCAAGATGGCACAGCAGAAGTACGATCTGGAGAAGGCAGCCGAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTGTGCCATCTTGATCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTGTGCCATCTTGATCTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.437 | 0.429 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTGTGCCATCTTGATCTC&k=0&no_gap=0&offset=0&limit=50
0.623 | 0.185 | search_minus_done; http://172.18.8.135:50400/match?q=GAGATCAAGATGGCACAGCA&k=0&no_gap=0&offset=0&limit=42
0.627 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).