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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:01:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-23851 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w21h2 5', mRNA sequence.
DV683426.1:707-729
CAGCAGATGCCACAGCTACNACAGCAGCAA707CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
CGN-25769 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w31n18 5', mRNA sequence.
DV684730.1:253-275
CAGCAGATGCCACAGCTACAACAGCAGCAA253CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
TransId-219431 CACATN1 Coffea arabica cDNA clone CACATN1-6241TV similar to Putative phloem transcription factor M1 - Apium graveolens (Celery), mRNA sequence.
GR997465.1:315-337
CAGCAGATGCCACAGCTACAACAGCAGCAA315CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
TransId-214557 CACATN1 Coffea arabica cDNA clone CACATN1-4I42TV similar to Putative phloem transcription factor M1 - Apium graveolens (Celery), mRNA sequence.
GR999594.1:106-128
CAGCAGATGCCACAGCTACAACAGCAGCAA106CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
CC00-XX-SH3-036-G08-EM.F Coffea canephora SH3 Coffea canephora cDNA clone CC00-XX-SH3-036-G08-EM, mRNA sequence.
GT645808.1:291-313
CAGCAGATGCCACAGCTACAACAGCAGCAA291CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
CR00-XX-FV2-062-F10-EM.F Coffea racemosa FV2 Coffea racemosa cDNA clone CR00-XX-FV2-062-F10-EM, mRNA sequence.
GT667224.1:110-132
CAGCAGATGCCACAGCTACAACAGCAGCAA110CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
CA00-XX-FB2-078-H04-CB.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-078-H04-CB, mRNA sequence.
GT701685.1:450-472
CAGCAGATGCCACAGCTACAACAGCAGCAA450CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
CA00-XX-FB4-012-E10-QH.F Coffea arabica FB4 Coffea arabica cDNA clone CA00-XX-FB4-012-E10-QH, mRNA sequence.
GT712480.1:641-663
CAGCAGATGCCACAGCTATCACAGCAGCAA641CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
CA00-XX-SI3-035-E08-EM.F Coffea arabica SI3 Coffea arabica cDNA clone CA00-XX-SI3-035-E08-EM, mRNA sequence.
GT718503.1:384-406
CAGCAGATGCCACAGCTACAACAGCAGCAA384CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
CA00-XX-SS1-005-A05-EF.F Coffea arabica SS1 Coffea arabica cDNA clone CA00-XX-SS1-005-A05-EF, mRNA sequence.
GW462415.1:49-71
CAGCAGATGCCACAGCTACAACAGCAGCAA49CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA
CCES27 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site.
GF110679.1:1151-1173
CAGCAGATGCCACAGCTACAACAGCAGCAA1151CAAATCCCGCAGTTACAACAGCAGCAACAAATTCCACAGCTGCAACAACCACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTGTTGTAACTGCGGGATTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTGTTGTAACTGCGGGATTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.159 | 0.150 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTGTTGTAACTGCGGGATTTG&k=0&no_gap=0&offset=0&limit=50
1.094 | 0.935 | search_minus_done; http://172.18.8.135:50400/match?q=CAAATCCCGCAGTTACAACAGCA&k=0&no_gap=0&offset=0&limit=50
1.101 | 0.007 | cgi_end;

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