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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 20:45:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Human DNA sequence from clone RP11-181E22 on chromosome 1.
AL590434.16:24599-24618
ATTCAGGTTTTGCCTAATGGTTAGTTTATC24599TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Homo sapiens DNA, chromosome 1, nearly complete genome.
AP023461.1:34360742-34360761
ATTCAGGTTTTGCCTAATGGTTAGTTTATC34360742TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Homo sapiens isolate CHM13 chromosome 1.
CP068277.2:35001736-35001755
ATTCAGGTTTTGCCTAATGGTTAGTTTATC35001736TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Homo sapiens isolate NA24385 chromosome 1.
CP139523.1:35310501-35310520
ATTCAGGTTTTGCCTAATGGTTAGTTTATC35310501TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Homo sapiens isolate NA24385 chromosome 1.
CP139546.1:35348564-35348583
ATTCAGGTTTTGCCTAATGGTTAGTTTATC35348564TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Gallus gallus breed Huxu chromosome 12.
CP100566.1:4053487-4053506
TAGTAGCTGTACATTATAGATGTGTATTGC4053487TGCTTCTTGTGCTTTGTGCTGAGAACAGAAAGGGTAACACATATTTCTCA
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 21.
CP133522.1:10235044-10235063
CAAAGGAGAAGCCGAATCATCACAACAATG10235044TGCTTCTTGTGCTTTGTGCTTTTTCGTCGTTCGACAACACAGCACACGAG
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 21.
CP133545.1:10763507-10763526
CAAAGGAGAAGCCGAATCATCACAACAATG10763507TGCTTCTTGTGCTTTGTGCTTTTTCGTCGTTCGACAACACAGCACACGAG
Gadus morhua genome assembly, chromosome: 21.
LR633963.1:13800390-13800409
CAAAGGAGAAGCCGAATCATCACAACAATG13800390TGCTTCTTGTGCTTTGTGCTTTTCCTCGTTCAACAACACAGCACACGAGT
Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 1.
OU383773.1:137485655-137485674
GCGGTTCCAAGTTAATAGCACTGTTTCTTG137485655TGCTTCTTGTGCTTTGTGCTTCTGGAAATTTAGCTATAAGAAGTCTGAAA
Accipiter gentilis genome assembly, chromosome: 23.
OV839384.1:4866596-4866615
CGGTACCTGTGTATTATAGATGCATACTGC4866596TGCTTCTTGTGCTTTGTGCTTAGAACAGAAAGGGTAACACATGCTTCCCA
Meleagris gallopavo genome assembly, chromosome: 14.
OW982264.1:3438560-3438579
TAGTGGCTGTATATTACAGACGTGTATTGC3438560TGCTTCTTGTGCTTTGTGCTGAGAACAGAAAGGGTAACACATGTCTCATG
Meleagris gallopavo genome assembly, chromosome: 14.
OW982303.1:3287706-3287725
TAGTGGCTGTATATTACAGACGTGTATTGC3287706TGCTTCTTGTGCTTTGTGCTGAGAACAGAAAGGGTAACACATGTCTCATG
Vipera ursinii genome assembly, chromosome: 2.
OX365965.1:19893416-19893435
TGCTTCTCTCTTTGATTACTTTCCACCCGT19893416TGCTTCTTGTGCTTTGTGCTTTGGAGAATAACTTGACTCCCTCTTCTTTG
Haliaeetus albicilla genome assembly, chromosome: 24.
OX381661.1:20682797-20682816
CGGTACCTGTGTATTATAGATGCATACTGC20682797TGCTTCTTGTGCTTTGTGCTTAGAACAGAAAGGGTAACACATGCTTCCCA
Tetrao urogallus genome assembly, chromosome: 10.
OX596304.1:3667998-3668017
TAGTAGCTGTATATTATAGACGTGTATTGC3667998TGCTTCTTGTGCTTTGTGCTGAGAACAGAAAGGGTAACACATGTCTCATG
Sequence 173583 from Patent WO2014036048.
JC923208.1:362-381
TTGTGTGTAATAAATATTGCATAAATGTAC362TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTTA
JP 2014500723-A/14125: Polycomb-Associated Non-Coding RNAs.
LF206622.1:26103-26122
ATTCAGGTTTTGCCTAATGGTTAGTTTATC26103TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
JP 2018138019-A/14125: Polycomb-Associated Non-Coding RNAs.
MA442199.1:26103-26122
ATTCAGGTTTTGCCTAATGGTTAGTTTATC26103TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Sequence 14125 from patent US 10119144.
MM234966.1:26103-26122
ATTCAGGTTTTGCCTAATGGTTAGTTTATC26103TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Eukaryotic synthetic construct chromosome 1.
CP034487.1:35594651-35594670
ATTCAGGTTTTGCCTAATGGTTAGTTTATC35594651TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Eukaryotic synthetic construct chromosome 1.
CP034512.1:35594651-35594670
ATTCAGGTTTTGCCTAATGGTTAGTTTATC35594651TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
MuSite01-186 MuTAIL-PCR product Zea mays genomic clone MuSite01-186, genomic survey sequence.
BH417841.1:426-445
TTGTGTGTAATAAATATTACAGAAATGTAC426TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAAATGTTA
PUGBX01TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa333A02, genomic survey sequence.
BZ799852.1:46-65
TTGTGTGTAATAAATATTACAGAAATGTAC46TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTTA
1123032B03.x1 1123 - RescueMu Grid L Zea mays genomic, genomic survey sequence.
CG779186.1:291-310
TTGTGTGTAATAAATATTGCAGAAATGTAC291TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCATGATCGAAATGTTCA
Homo sapiens chromosome 3 clone RP11-259F24 map 3, LOW-PASS SEQUENCE SAMPLING.
AC024015.2:62759-62778
ATTCAGGTTTTGCCTAATGGTTAGTTTATC62759TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Homo sapiens chromosome 1 clone RP11-10D24, WORKING DRAFT SEQUENCE, 31 unordered pieces.
AC026026.3:57988-58007
ATTCAGGTTTTGCCTAATGGTTAGTTTATC57988TGCTTCTTGTGCTTTGTGCTAACAGGGTCACTGCTGCTAGGGCCCTTAGA
Zea mays cultivar B73 chromosome 1 clone CH201-162D1, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces.
AC189098.5:84092-84111
TTGTGTGTAATAAATATTGCATAAATGTAC84092TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTTA
Zea mays cultivar B73 chromosome 6 clone CH201-127C16, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC207575.5:146363-146382
TTGTGTGTAATAAATATTGCAGAAATGTAC146363TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTCA
Zea mays cultivar B73 chromosome 5 clone CH201-353A14, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.
AC207656.5:107391-107410
TTGTGTGTAATAAATATTGCAGAAATGTAC107391TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCATGATCGAAATGTTTA
Zea mays cultivar B73 chromosome 6 clone CH201-306I19, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.
AC218978.4:63889-63908
TTGTGTGTAATAAATATTGCAGAAATGTAC63889TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTCA
Zea mays cultivar LT2357 chromosome 1.
CP116739.1:16399052-16399071
TTGTGTGTAATAAATATTGCATAAATGTAC16399052TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTTA
Zea mays cultivar LT2357 chromosome 6.
CP116744.1:13273483-13273502
TCAATGATGTTACCACTGCTATGATCTGAA13273483TGCTTCTTGTGCTTTGTGCTTGGTACTTGCTGATCAAAACTGATCTTGGA
Zea mays cultivar LT2357 chromosome 6.
CP116744.1:87093836-87093855
TTGTGTGTAATAAATATTGCAGAAATGTAC87093836TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTTA
Zea mays cultivar LT2357 chromosome 8.
CP116746.1:118508134-118508153
TTGTGTGTAATAAATATTGCATAAATGTAC118508134TGCTTCTTGTGCTTTGTGCTTTGTCTGCGCTTTCGTGATCAAAATGTTTG
Zea mays cultivar LT2357 chromosome 9.
CP116747.1:147436495-147436514
TTGTGTGTAATAAATATTACAGAAATGTAC147436495TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTTA
Zea mays cultivar LT2357 chromosome 10.
CP116748.1:60491010-60491029
TTGTGTGTAATAAATATTGCATAAATGTAC60491010TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTTA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2522285-2522304
TTAAATTGTGCAGCTGTGACTACCATGTGC2522285TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAGGAGTTTTTTATTACA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2612518-2612537
TTAAATTGTGCAGCTGTGACTACCATGTGC2612518TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAGGAGTTTTTTATTACA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2498568-2498587
TTAAATTGTGCAGCTGTGACTACCATGTGC2498568TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAAGAGTTTTTTTATTAC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2542188-2542207
TTAAATTGTGCAGCTGTGACTACCATGTGC2542188TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAGGAGTTTTTTATTACA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2548429-2548448
TTAAATTGTGCAGCTGTGACTACCATGTGC2548429TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAAGAGTTTTTTATTACA
Zea mays genome assembly, chromosome: 1.
LR897967.1:16275021-16275040
TTGTGTGTAATAAATATTGCATAAATGTAC16275021TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTTA
Zea mays genome assembly, chromosome: 5.
LR897971.1:52507551-52507570
TTGTGTGTAATAAATATTGCAGAAATGTAC52507551TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCATGATCGAAATGTTTA
Zea mays genome assembly, chromosome: 6.
LR897972.1:22893928-22893947
TCAATGATGTTACCACTGCTATGATCTGAA22893928TGCTTCTTGTGCTTTGTGCTTGGTACTTGCTGATCAAAACTGATCTTGGA
Zea mays genome assembly, chromosome: 6.
LR897972.1:87334437-87334456
TTGTGTGTAATAAATATTGCAGAAATGTAC87334437TGCTTCTTGTGCTTTGTGCTTTGTCTGTGCTTTCGTGATCGAAATGTTCA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2639473-2639492
TTAAATTGTGCAGCTGTGACTACCATGTGC2639473TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAGGAGTTTTTTATTACA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2632124-2632143
TTAAATTGTGCAGCTGTGACTACCATGTGC2632124TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAGGAGTTTTTTATTACA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2715148-2715167
TTAAATTGTGCAGCTGTGACTACCATGTGC2715148TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAGGAGTTTTTTATTACA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2755099-2755118
TTAAATTGTGCAGCTGTGACTACCATGTGC2755099TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAGGAGTTTTTTATTACA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2688985-2689004
TTAAATTGTGCAGCTGTGACTACCATGTGC2688985TGCTTCTTGTGCTTTGTGCTGTGCGCTCAGGACAGGAGTTTTTTATTACA
Draba incana genome assembly, chromosome: 12.
OY755213.1:10196092-10196111
TTTCATTTTTGGAGCGGCAATGACGGTATT10196092TGCTTCTTGTGCTTTGTGCTTCTTCAGGAATGATTTCATCTTTGACGGTG
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:140983208-140983227
TGTTTTCTACTTCTGTCTCATTTCCCATGT140983208TGCTTCTTGTGCTTTGTGCTTGAAAACATGAATTACTTGTTGTTTTATGC
Agrypnus murinus genome assembly, chromosome: 4.
OV816027.1:20432872-20432891
TAAGGGTTTATTCTCGTTTTTTCTTCTTTG20432872TGCTTCTTGTGCTTTGTGCTATAGGCAAAAGTTCATAGTTTACCACCACA
Thecophora atra genome assembly, chromosome: 1.
OW569397.1:73553645-73553664
CATCTCATCTGTTGGCGGTTTTTAATTGTT73553645TGCTTCTTGTGCTTTGTGCTTCTACGGGCCTCTTCCCTCTTTTGTTCTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTTCTTGTGCTTTGTGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTTCTTGTGCTTTGTGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.485 | 0.476 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTTCTTGTGCTTTGTGCT&k=0&no_gap=0&offset=0&limit=50
0.612 | 0.127 | search_minus_done; http://172.18.8.135:50400/match?q=AGCACAAAGCACAAGAAGCA&k=0&no_gap=0&offset=0&limit=0
0.612 | 0.000 | cgi_end;

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