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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-08 06:36:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Zebrafish DNA sequence from clone CH211-286D20.
AL954834.12:137822-137841
TTCCCAAAACTTATTTACCAATGACTGCAT137822TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Zebrafish DNA sequence from clone CH211-176D9 in linkage group 24.
BX005079.6:94172-94191
TTCCCAAAACTTATTTACCAATGACTGCAT94172TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Zebrafish DNA sequence from clone CH211-249G22 in linkage group 18.
BX255955.3:28414-28433
TTCCCAAAACTTATTTACCAATGACTGCAT28414TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Zebrafish DNA sequence from clone DKEY-29J9 in linkage group 21.
BX927237.15:42261-42280
TTCCCAAAACTTATTTACCAATGACTGCAT42261TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio strain T5D chromosome 3.
CP068737.1:371286-371305
TTCCCAAAACTTATTTACCAATGACTGCAT371286TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio strain T5D chromosome 3.
CP068737.1:4497753-4497772
TTCCCAAAACTTATTTACCAATGACTGCAT4497753TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio strain T5D chromosome 11.
CP068745.1:30415971-30415990
TTCCCAAAACTTATTTACCAATGACTGCAT30415971TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Danio rerio strain T5D chromosome 21.
CP068755.1:36923867-36923886
TTCCCAAAACTTATTTACCAATGACTGCAT36923867TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio strain T5D chromosome 24.
CP068758.1:35840118-35840137
TTCCCAAAACTTATTTACCAATGACTGCAT35840118TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Danio rerio strain Tubingen chromosome 11.
CP137024.2:32650613-32650632
TTCCCAAAACTTATTTACCAATGACTGCAT32650613TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Danio rerio strain Tubingen chromosome 13.
CP137026.1:16369528-16369547
TTCCCAAAACTTATTTACCAATGACTGCAT16369528TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio strain Tubingen chromosome 23.
CP137037.1:7822152-7822171
TTCCCAAAACTTATTCACCAATGACTGCAT7822152TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Danio rerio strain Tubingen chromosome 24.
CP137038.1:39454100-39454119
TTCCCAAAACTTATTTACCAATGACTGCAT39454100TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Danio rerio strain Tubingen chromosome 7.
CP137044.2:46208237-46208256
TTCCCAAAACTTATTCACCAATGACTGCAT46208237TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Zebrafish DNA sequence from clone DKEY-73P2 in linkage group 3.
CR774195.4:58701-58720
TTCCCAAAACTTATTTACCAATGACTGCAT58701TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio genome assembly, chromosome: 3.
LR812065.1:3495081-3495100
TTCCCAAAACTTATTTACCAATGACTGCAT3495081TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio genome assembly, chromosome: 11.
LR812073.1:30981354-30981373
TTCCCAAAACTTATTCACCAATGACTGCAT30981354TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Danio rerio genome assembly, chromosome: 25.
LR812087.1:12437996-12438015
TTCCCAAAACTTATTTACCAATGACTGCAT12437996TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio aesculapii genome assembly, chromosome: 18.
LR812514.1:9973158-9973177
TTCCCAAAACTTGTTTACCAATGCCTGCAT9973158TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCGAAAGTTTTAATTT
Danio kyathit genome assembly, chromosome: 6.
LR812524.1:10323200-10323219
TTTCCAAAACTTATTTACCACTGCCTGCAT10323200TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTGATGT
Danio kyathit genome assembly, chromosome: 15.
LR812533.1:58256302-58256321
TTTCCAAAACTTATTTACCACTGCCTGCAT58256302TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTGATGT
Danio rerio strain Nadia (NA) genome assembly, chromosome: 9.
LR812577.1:50307320-50307339
TTCCCAAAACTTATTTACCAATGACTGCAT50307320TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio genome assembly, chromosome: 3.
OX063292.1:3532488-3532507
TTCCCAAAACTTATTTACCAATGACTGCAT3532488TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Danio rerio genome assembly, chromosome: 7.
OX063296.1:46359354-46359373
TTCCCAAAACTTATTCACCAATGACTGCAT46359354TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Danio rerio genome assembly, chromosome: 25.
OX063314.1:12419336-12419355
TTCCCAAAACTTATTTACCAATGACTGCAT12419336TGCTTGGAGTCTTTTGAAGGGATAGCTGAAAAAGTCAAAAGTTTTAATGT
Lotus japonicus cDNA, clone: LjFL2-025-CA05, 5' end, suspension-cultured cells treated with salicylic acid or methyljasmonate.
BW630271.1:35-54
CTACTGGATCGAGGGCTTACTGGATAAAAC35TGCTTGGAGTCTTTTGAAGGGTGCAAATGGGGTTCTAGTTCCAGGAGGTT
Lotus japonicus cDNA, clone: LjFL2-027-D-C08, 5' end, suspension-cultured cells treated with salicylic acid or methyljasmonate.
BW631107.1:289-308
TAACAAAGAGGATCCTAACGCACATAAAAC289TGCTTGGAGTCTTTTGAAGGGTGCAAATGGGGTTCTAGTTCCAGGAGGTT
Lotus japonicus cDNA, clone: LjFL2-040-CA12, 5'-end sequence, suspension-cultured cells treated with salicylic acid or methyljasmonate.
FS318048.1:393-412
TAACAAAGAGGATCCTAACGCACATAAAAC393TGCTTGGAGTCTTTTGAAGGGTGCAAATGGGGTTCTAGTTCCAGGAGGTT
Lotus japonicus cDNA, clone: LjFL3-004-BA11, 5'-end sequence.
FS319351.1:360-379
TAACAAAGAGGATCCTAACGCACATAAAAC360TGCTTGGAGTCTTTTGAAGGGTGCAAATGGGGTTCTAGTTCCAGGAGGTT
Lotus japonicus cDNA, clone: LjFL3-010-DB11, 5'-end sequence.
FS321647.1:496-515
TAACAAAGAGGATCCTAACGCACATAAAAC496TGCTTGGAGTCTTTTGAAGGGTGCAAATGGGGTTCTAGTTCCAGGAGGTT
Danio rerio genomic clone DKEY-121D8, genomic survey sequence.
BX159068.1:159-178
TTCCCAAAACTTATTCACCAATGACTGCAT159TGCTTGGAGTCTTTTGAAGGGATAGCTGGAAAAGTCAAAAGTTTTAATGT
Lotus japonicus genomic DNA, chromosome 3, clone: LjT45D11, TM0996.
AP007733.2:21744-21763
GTAACTGCAGGATCCTAACGCACATAAAAC21744TGCTTGGAGTCTTTTGAAGGTATTTTTCTTACTCTAGGGTCTGAATGTCT
Medicago truncatula chromosome 2 clone mth2-10d10, complete sequence.
AC155884.2:57408-57427
GTAACTGCAGGATCCAAATGCTTATAGAGC57408TGCTTGGAGTCTTTTGAAGGTTTCCTACTATTTAAACTGAACGTGTTTTC
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:16270366-16270385
GTAACTGCAGGATCCTAACGCACATAAAAC16270366TGCTTGGAGTCTTTTGAAGGTATTTTTCTTACTCTAGGGTCTGAATGTCT
Cicer arietinum chromosome Ca1.
CP039331.1:39615916-39615935
GTTATTGCAGGATCCGAATGCTTTTAGAGC39615916TGCTTGGAGTCTTTTGAAGGTTTCCTACTACTTCAACTGAATGTGTTTTG
Cicer arietinum chromosome Ca1.
CP040766.1:39615826-39615845
GTTATTGCAGGATCCGAATGCTTTTAGAGC39615826TGCTTGGAGTCTTTTGAAGGTTTCCTACTACTTCAACTGAATGTGTTTTG
Medicago arabica genome assembly, chromosome: 8.
OX326971.1:37070428-37070447
GTCACTGCAGGATCCGAAGGCTTATAGAGC37070428TGCTTGGAGTCTTTTGAAGGTTTGCTCCTATTTAAACTGAATATCTTTTC
Medicago arabica genome assembly, chromosome: 8.
OX326971.1:37083640-37083659
GTCACTGCAGGATCCGAAGGCTTATAGAGC37083640TGCTTGGAGTCTTTTGAAGGTTTGCTCCTATTTAAACTGAATATCTTTTC
Trifolium dubium genome assembly, chromosome: 9.
OX638070.1:26459887-26459906
GTAACTGCAGGATCCTAATGCATATAGAGC26459887TGCTTGGAGTCTTTTGAAGGTTTCTTACTATTCAAATTGAATGCGTTTCT
Medicago lupulina genome assembly, chromosome: 1.
OY283139.1:69489415-69489434
GTAACTGCAGGATCCGAATGCTTATAGAGC69489415TGCTTGGAGTCTTTTGAAGGTTTGCTACTATTTAAACTGAATATGTTTTC
Zebrafish DNA sequence from clone DKEY-30G5 in linkage group 3.
BX004816.11:108060-108079
ACATTAAAACTTTTGACTTTTTCAGCTATC108060CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTAAATAAGTTTTGGGAA
Zebrafish DNA sequence from clone DKEYP-21D12 in linkage group 25.
BX321892.13:155980-155999
ACATTAAAACTTTTGACTTTTCCAGCTATC155980CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTGAATAAGTTTTGGGAA
Danio rerio strain Tubingen chromosome 3.
CP137040.2:1539179-1539198
ACATTAAAACTTTTGACTTTTTCAGCTATC1539179CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTAAATAAGTTTTGGGAA
Zebrafish DNA sequence from clone DKEY-28O14 in linkage group 11.
CR556713.11:69223-69242
ACATTAAAACTTTTGACTTTTCCAGCTATC69223CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTAAATAAGTTTTGGGAA
Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16.
CR848789.11:130013-130032
ACATTAAAACTTTTGACTTTTCCAGCTATC130013CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTGAATAAGTTTTGGGAA
Gadus morhua genome assembly, chromosome: 23.
LR633965.1:18525091-18525110
TTCAACATTGCATTTTCATTTGATTATGGT18525091CCTTCAAAAGACTCCAAGCAAAGCTTGAAAAAGCTCTCACCATGAATGTG
Danio rerio genome assembly, chromosome: 3.
LR812040.1:1944980-1944999
ACATTAAAACTTTTGACTTTTTCAGCTATC1944980CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTAAATAAGTTTTGGGAA
Danio kyathit genome assembly, chromosome: 7.
LR812525.1:15477263-15477282
ACATCAAAACTTTTGACTTTTCCAGCTATC15477263CCTTCAAAAGACTCCAAGCAATGCAGGCAGTGGTAAATAAGTTTTGGAAA
fp36c10.y3 zebrafish gridded kidney Danio rerio cDNA clone IMAGE:4745107 5', mRNA sequence.
BI474205.1:71-90
ACATTAAAACTTTTGACTTTTTCAGCTATC71CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTAAATAAGTTTTGGGAA
AGENCOURT_22431304 NIH_ZGC_7 Danio rerio cDNA clone IMAGE:7269819 5', mRNA sequence.
CN506149.1:153-172
ACATTAAAACTTTTGACTTTTCCAGCTATC153CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTAAATAAGTTTTGGGAA
AGENCOURT_55087046 NIH_ZGC_7 Danio rerio cDNA clone IMAGE:7990399 5', mRNA sequence.
DR718419.1:200-219
ACATTAAAACTTTTGACTTTTCCAGCTATC200CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTAAATAAGTTTTGGGAA
9179540 ZF31 Danio rerio cDNA clone 3254737, mRNA sequence.
EB908837.1:95-114
ACATTAAAACTTTTGACTTTTCCAGCTATC95CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTGAATAAGTTTTGGGAA
TSA: Medicago sativa cultivar Chilean F0D_9647 mRNA sequence.
JL876074.1:1175-1194
AACCACCTGGAACTAGAACTCCATTTGCAC1175CCTTCAAAAGACTCCAAGCAAGACTACTAATAAAGACAATTTTAGGAATA
Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone DKEY-64H11.
CR556716.9:98766-98785
ACATTAAAACTTTTGACTTTTCCAGCTATC98766CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTGAATAAGTTTTGGGAA
Zebrafish DNA sequence *** SEQUENCING CANCELLED *** from clone DKEY-190J22.
CR853288.16:64193-64212
ACATTAAAACTTTTGACTTTTCCAGCTATC64193CCTTCAAAAGACTCCAAGCAATGCAGTCATTGGTGAATAAGTTTTGGGAA
Ipomoea trifida cultivar NCNSP0306 chromosome 3.
CP025646.1:7016017-7016036
CGCGCGTCCAAGGTGGCGTCCAAGTATCAA7016017CCTTCAAAAGACTCCAAGCATTCCGCGAAGCAGGCCTTGGACGCGCGTCC
Trifolium dubium genome assembly, chromosome: 7.
OX638068.1:16925971-16925990
AGAAACGCATTCAATTTGAATAGTAAGAAA16925971CCTTCAAAAGACTCCAAGCAGCTCTATATGCATTAGGATCCTGCAGTTAC
Astragalus glycyphyllos genome assembly, chromosome: 5.
OY754311.1:43335800-43335819
ACAAAAGCATTCAGTCTAAATGGTAGGAAA43335800CCTTCAAAAGACTCCAAGCAGCTCTAAATGCATTGGGATCCTGCAGTTAC
Herminia tarsipennalis genome assembly, chromosome: 3.
OX243833.2:659781-659800
TTTGTCGGATGACCTCGTTGCGAATTTTAT659781CCTTCAAAAGACTCCAAGCATAGTTCGCTCCATAGCCCGCTGCGTGACTT
Orchestes rusci genome assembly, chromosome: 1.
OY293304.1:69799430-69799449
CAATCAAGTGCTCGGGGAGCAAAGGGAGCT69799430CCTTCAAAAGACTCCAAGCAGAAACGTGGGGCAGTGAATAGCCCCCCCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTTGGAGTCTTTTGAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTTGGAGTCTTTTGAAGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.703 | 0.694 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTTGGAGTCTTTTGAAGG&k=0&no_gap=0&offset=0&limit=50
0.969 | 0.266 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCAAAAGACTCCAAGCA&k=0&no_gap=0&offset=0&limit=10
0.983 | 0.013 | cgi_end;

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