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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:39:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CLRY7714.b1_C09.ab1 CLR(XYZ) lettuce serriola Lactuca serriola cDNA clone CLRY7714, mRNA sequence.
DW119110.1:250-274
CTCTGCTACTCACCTTATAACCTTCTTTCT250TGCTTTATCATTTCTCTCCAAAGGTGTTTTCGGAGCTACATTCACATTTGTCAAC
CLVX447.b1_M15.ab1 CLV(XYZ) lettuce virosa Lactuca virosa cDNA clone CLVX447, mRNA sequence.
DW152626.1:248-272
CTCTGCTACTCACCTTATCACCTTCTTTCT248TGCTTTATCATTTCTCTCCAAAGGTGTTTTCGGAGCTACATTCTCATTTGTCAAC
CLSM8013.b1_J12.ab1 CLS(LMS) lettuce sativa Lactuca sativa cDNA clone CLSM8013, mRNA sequence.
DY974343.1:226-250
CTCTGCTACTCACCTTATAACCTTCTTTCT226TGCTTTATCATTTCTCTCCAAAGGTGTTTTCGGAGCTACATTCACATTTGTCAAC
TSA: Lactuca serriola Serrassy_T_P2_6043 mRNA sequence.
JO029056.1:305-329
CTCTGCTACTCACCTTATAACCTTCTTTCT305TGCTTTATCATTTCTCTCCAAAGGTGTTTTCGGAGCTACATTCACATTTGTCAAC
TSA: Lactuca sativa Letassy_X1_21266 mRNA sequence.
JI582213.1:1429-1453
GTTGACAAATGTGAATGTAGCTCCGAAAAC1429ACCTTTGGAGAGAAATGATAAAGCAAGAAAGAAGGTTATAAGGTGAGTAGCAGAG
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:84259509-84259533
TATAATCATGGAAAGCTTTGAAGAAAAATT84259509ACCTTTGGAGAGAAATGATAAAGCAAGAAAGAAGGTGATAAGGTGAGTAGCAGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTTTATCATTTCTCTCCAAAGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTTTATCATTTCTCTCCAAAGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.366 | 0.357 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTTTATCATTTCTCTCCAAAGGT&k=0&no_gap=0&offset=0&limit=50
0.485 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=ACCTTTGGAGAGAAATGATAAAGCA&k=0&no_gap=0&offset=0&limit=46
0.486 | 0.001 | cgi_end;

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