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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 18:39:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys torridus genome assembly, chromosome: 22.
LR877209.1:449090-449107
ATCACTAGTCAAGATAATAGCCCACAGATT449090TGCTTTCAGGCCAATACAATGGAGGAATTTTCTCAATTCAGATTCTCT
Capricornis sumatraensis isolate serow.1 chromosome 1.
CP135626.1:143374543-143374560
TCCTCAAAATCTGCCTCCCCCTTTTCTCAT143374543TGCTTTCAGGCCAATACATGGAACAAAATGTCAACTTTACCCAAATGG
Cervus elaphus genome assembly, chromosome: 31.
OU343108.1:36349717-36349734
TCCTCAAAATCTGCCTCCCCCTTTTCTCAT36349717TGCTTTCAGGCCAATACATGGAATAAAATGTCAACTTTACCCAAGTGG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 29.
OX459965.2:34821031-34821048
TCCTCAAAATCTGCCTCCCCCTTTTCTCAT34821031TGCTTTCAGGCCAATACATGGAATAAAATGTCAACTTTACCCAAGTGG
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:209967745-209967762
GTAGCCTGTAGGTCATGGATAGCTGGGCAC209967745TGCTTTCAGGCCAATACAGTAAGGTCATGGCGGAAAGCAGGCACTCTG
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:112239379-112239396
GTTATTTTGTATGGCTTAATATTCTTATCA112239379TGCTTTCAGGCCAATACAGAACGGTGCGCTCGGCCGAGCACACCATTA
Rhinatrema bivittatum genome assembly, chromosome: 8.
LR584394.1:81319677-81319694
TTATTATGTACAAGGAGCTGCACCCCTGCT81319677TGCTTTCAGGCCAATACAATAAATAAGAAGCACGGGAAAATGTGTACT
Nesoenas mayeri genome assembly, chromosome: 3.
OY720058.1:66055050-66055067
AATTTCAGCATTGTTTCCAGTTTAAAAGTA66055050TGCTTTCAGGCCAATACAAACAACCAAAATGGTTGTTTCAAACTGGAG
Chelon labrosus genome assembly, chromosome: 14.
OY741302.1:8359804-8359821
GGTGGGGGAACATAATAGGAAATTTCGGGG8359804TGCTTTCAGGCCAATACAGAGGAACATTAGGAAATTTTGCAATGTGGT
Valencia hispanica genome assembly, chromosome: 4.
OY747703.1:54635604-54635621
CCTAGCAGAGCATGACAACTTGTGAGACTG54635604TGCTTTCAGGCCAATACAGGTATTCGTATTTTAAGTGGAATTGTTTAA
Theobroma cacao genome assembly, chromosome: 1.
OY284458.1:35839439-35839456
AAATAGAAGTCCATCTCCTAGGCGAGGCTT35839439TGCTTTCAGGCCAATACATTTTTTGACATCATAATTTTCATCCATATT
Chrysotoxum bicinctum genome assembly, chromosome: 4.
OU426990.1:59530384-59530401
AGGACATGCTGCATGCTTGTATCCTTGTAC59530384TGCTTTCAGGCCAATACAAATACGGGCTATGTCCGTTGAAAATCCTTT
Thumatha senex genome assembly, chromosome: 9.
OX419733.1:13061833-13061850
TACTTTTATCACTTACGGTGTTCCATGTGG13061833TGCTTTCAGGCCAATACAAGACTGTTCATCTTCACCCTTGGGACAATC
Onychomys arenicola genome assembly, chromosome: 22.
OX460368.1:8223384-8223401
AGAGAATCTGAATTGAGAAAATTCCTCCAT8223384TGTATTGGCCTGAAAGCAAATCTGTGGGCTATTATCTTGACTAGTGAT
Onychomys arenicola genome assembly, chromosome: 22.
OX460463.1:8629846-8629863
AGAGAATCTGAATTGAGAAAATTCCTCCAT8629846TGTATTGGCCTGAAAGCAAATCTGTGGGCTATTATCTTGACTAGTGAT
Onychomys torridus genome assembly, chromosome: 22.
OX460903.1:7813103-7813120
AGAGAATCTGAATTGAGAAAATTCCTCCAT7813103TGTATTGGCCTGAAAGCAAATCTGTGGGCTATTATCTTGACTAGTGAT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 26.
OX596110.1:18730159-18730176
CCACTTGGGTAAAGTTGACATTTTATTCCA18730159TGTATTGGCCTGAAAGCAATGAGAAAAGGGGGAGGCAGATTTTGAGGA
Muntiacus reevesi genome assembly, chromosome: 21.
OZ005645.1:18478170-18478187
CCACTTGGGTAAAGTTGACATTTTATTCCC18478170TGTATTGGCCTGAAAGCAATGGGAAAAGGGGGAGGCAGATTCTGAAGA
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:172104752-172104769
GGTGCTCACCCGCTCTCCCGCGACTTTTAC172104752TGTATTGGCCTGAAAGCAGGGGAAAGTTGTAAAGGAAAACCTCCAAAG
Rhinatrema bivittatum genome assembly, chromosome: 9.
LR584395.1:1241502-1241519
AATGCCGGTTAACAGTGCGCTCCACTGTAC1241502TGTATTGGCCTGAAAGCAAGGTAAGAGCAGCCAGGTCAGAGAGCCAAG
Rhinatrema bivittatum genome assembly, chromosome: 9.
LR584395.1:1270215-1270232
AATGCCGGTTAACAGTGCGCTCCACTGTAC1270215TGTATTGGCCTGAAAGCAAGGTAAGAGCAGCCAGGTCAGAGAGCCAAG
Rhinatrema bivittatum genome assembly, chromosome: 9.
LR584395.1:157459541-157459558
AAACAGTGCGCTCAGCTGAGTGCACTTTAC157459541TGTATTGGCCTGAAAGCAGATGACATACAGCAATTAAACAAGAAAGTG
Rhinatrema bivittatum genome assembly, chromosome: 12.
LR584398.1:34114888-34114905
AGAAGCAGGGTAACTGCGGCCGCACTTTAC34114888TGTATTGGCCTGAAAGCAAGAAGGAGCTATTTACATTTCTGAAATCTT
Streptopelia turtur genome assembly, chromosome: 3.
LR594553.2:57156409-57156426
CTCCAGTTTGAAACAACCATTTTGGTTGTT57156409TGTATTGGCCTGAAAGCATGCTTTTAAACTGGAAACAATGCTGAAATT
Streptopelia turtur genome assembly, chromosome: 3.
LR594553.2:57182076-57182093
CTCCAGTTTGAAACAACCATTTTGGTTGTT57182076TGTATTGGCCTGAAAGCATGCTTTTAAACTGGAAACAATGCTGAAATT
Scomber scombrus genome assembly, chromosome: 15.
OY829932.1:19086929-19086946
TTTTTTTTAAGAATAGTTTAATACAATGAA19086929TGTATTGGCCTGAAAGCAATAGCACAACTTGTAAGTGCAAGCTCATTG
Theobroma cacao isolate Sca6 chromosome 1.
CP139290.1:3343917-3343934
AATATGGATGAAAATTATGATGTCAAAAAA3343917TGTATTGGCCTGAAAGCAAAGCCTCGCCTAGGAGATGGACTTCTATTT
Theobroma cacao genome assembly, chromosome: I.
LT594788.1:3358386-3358403
AATATGGATGAAAATTATGATGTCAAAAAA3358386TGTATTGGCCTGAAAGCAAAGCCTAGCCTAGGAGATGGACTTCTATTT
Ajuga chamaepitys genome assembly, chromosome: 5.
OY282499.1:59991094-59991111
AATAATACAACAATACAAATTTAACTCTAC59991094TGTATTGGCCTGAAAGCAAAGATGATTTAAACTAATGCCTCAAAGCTG
Theobroma cacao genome assembly, chromosome: 1.
OY284438.1:3403320-3403337
AATATGGATGAAAATTATGATGTCAAAAAA3403320TGTATTGGCCTGAAAGCAAAGCCTCGCCTAGGAGATGGACTTCTATTT
Theobroma cacao genome assembly, chromosome: 1.
OY284448.1:3405135-3405152
AATATGGATGAAAATTATGATGTCAAAAAA3405135TGTATTGGCCTGAAAGCAAAGCCTCGCCTAGGAGATGGACTTCTATTT
Melangyna quadrimaculata genome assembly, chromosome: 3.
OX439485.1:86286731-86286748
TCTTCTTCAGCTATTGCGAGTTGTATTGGT86286731TGTATTGGCCTGAAAGCAGCACCATAGATAGCACACGAAGAAATAATT
Urbanus simplicius genome assembly, chromosome: 30.
OX453087.1:3668840-3668857
CGGACTTGAACTAAGTATTAACTTCAACCT3668840TGTATTGGCCTGAAAGCAAAATTACTTACAACTATGGTTTTTTGATTT
Othius punctulatus genome assembly, chromosome: 3.
OX638140.1:64690216-64690233
TACTTTTTCTCCGATTATCGTCAAAGTGAC64690216TGTATTGGCCTGAAAGCACACCTGAAGATACATTTTAACACCACTTCA
Cepaea hortensis genome assembly, chromosome: 18.
OY992893.1:85969699-85969716
TGGGTCGGGTTTGAGATAGGGCCATCCCAT85969699TGTATTGGCCTGAAAGCAGGGAGGGAAAGACGGTCAATCATTCCCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTTTCAGGCCAATACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTTTCAGGCCAATACA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.202 | 0.193 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTTTCAGGCCAATACA&k=0&no_gap=0&offset=0&limit=50
0.331 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=TGTATTGGCCTGAAAGCA&k=0&no_gap=0&offset=0&limit=37
0.345 | 0.014 | cgi_end;

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