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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-24 14:06:19, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Zea mays cultivar B73 chromosome 5 clone CH201-342E5, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC185656.4:39516-39535
TTCAAATGCGCATTTACTATCAATTCCCCT39516TGGAAAACCTGCACACTTTGATGGAGAGGACTATTCATTTTGGAGCCATA
Zea mays cultivar B73 chromosome 4 clone ZMMBBb-111A22, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces.
AC195196.4:146372-146391
TTCAAATGCGCATTTACTATCAATTCCCCT146372TGGAAAACCTGCACACTTTGATGGAGAAGACTATTCATTTTGGAGCCATA
Zea mays cultivar B73 chromosome 5 clone CH201-501I18, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC234188.4:202739-202758
TTCAAATGCGCATTTACTATCAATTCCCCT202739TGGAAAACCTGCACACTTTGATGGAGAGGACTATTCATTTTGGAGCCATA
Zea mays cultivar LT2357 chromosome 4.
CP116742.1:221964037-221964056
TTCAAATGCGCATTTACTATCAATTCCCCT221964037TGGAAAACCTGCACACTTTGATGGAGAAGACTATTCATTTTGGAGCCATA
Musa acuminata subsp. malaccensis isolate AA chromosome 11.
CP126380.1:34062096-34062115
GCATCACTACTGCAGCAGCAAAAACTTTCA34062096TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTGCTACATGGACG
Musa acuminata subsp. malaccensis isolate AA chromosome 22.
CP126391.1:33472953-33472972
GCATCACTACTGCAGCAGCAAAAACTTTCA33472953TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTGCTACATGGACG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A11.
HG996475.1:33873214-33873233
GCATCACTACTGCAGCAGCAAAAACTTTCA33873214TGGAAAACCTGCACACTTTGTAAACACTTAATAGAAGTACTACATGGACG
Zea mays genome assembly, chromosome: 4.
LR897970.1:222157176-222157195
TTCAAATGCGCATTTACTATCAATTCCCCT222157176TGGAAAACCTGCACACTTTGATGGAGAAGACTATTCATTTTGGAGCCATA
Musa schizocarpa genome assembly, chromosome: S11.
LS990925.1:36167497-36167516
GCATCACTACTGCAGCAACAAAAACTTTCA36167497TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTACTACATGGACA
Matricaria chamomilla var. recutita genome assembly, chromosome: 2_2.
OY720577.1:297132146-297132165
AAAAAAATTTGCCTTCTCGGGTAAACTTGT297132146TGGAAAACCTGCACACTTTGATTAGTTAAACCGTGTCACTTTGATTAGTA
Zea mays subsp. mays genome assembly, chromosome: 1.
OY741930.1:177688327-177688346
TTCAAATGCACACCTACTTCCAATTCCCCT177688327TGGAAAACCTGCACACTTTGATGGAGAGGACTATTTGTTTTGGAGTCATA
Zea mays subsp. mays genome assembly, chromosome: 2.
OZ119267.1:186728799-186728818
TTCAAATGCACATTTGCTTTCCATTCCTCT186728799TGGAAAACCTGCACACTTTGATGGAGAGGACTACGGATTTTGGAGTCACA
Zea mays subsp. mays genome assembly, chromosome: 4.
OZ119269.1:219159114-219159133
TTCAAATGCGCATTTACTATCAATTCCCCT219159114TGGAAAACCTGCACACTTTGATGGAGAAGACTATTCATTTTGGAGCCATA
Zea mays subsp. mays genome assembly, chromosome: 5.
OZ119270.1:66817672-66817691
TTCAAATGCGCATTTACTATCAATTCCCCT66817672TGGAAAACCTGCACACTTTGATGGAGAGGACTATTCATTTTGGAGCCATA
Zea mays subsp. mays genome assembly, chromosome: 4.
OZ119279.1:263663994-263664013
TTCAAATGCGCATTTACTATCAATTCCCCT263663994TGGAAAACCTGCACACTTTGATGGAGAAGACTATTCATTTTGGAGCCATA
Zea mays subsp. mays genome assembly, chromosome: 5.
OZ119280.1:66358043-66358062
TTCAAATGCGCATTTACTATCAATTCCCCT66358043TGGAAAACCTGCACACTTTGATGGAGAGGACTATTCATTTTGGAGCCATA
Zea mays subsp. mays genome assembly, chromosome: 8.
OZ119283.1:2599350-2599369
TTCAAATGCACACCTACTTTCAATTCCCCT2599350TGGAAAACCTGCACACTTTGATGGAGAGGACTATTCGTTTTGGAGTCATA
Zea mays subsp. mays genome assembly, chromosome: 1.
OZ119286.1:215803195-215803214
TTCAAATGCACACCTACTTCCAATTCCCCT215803195TGGAAAACCTGCACACTTTGATGGAGAGGACTATTTGTTTTGGAGTCATA
Zea mays subsp. mays genome assembly, chromosome: 5.
OZ119290.1:68109627-68109646
TTCAAATGCGCATTTACTATCAATTCCCCT68109627TGGAAAACCTGCACACTTTGATGGAGAGGACTATTCATTTTGGAGCCATA
Tanacetum parthenium genome assembly, chromosome: 2.
OZ123470.1:20177447-20177466
AATATCATGCTTGTAGAAAGATTTTACCGT20177447TGGAAAACCTGCACACTTTGTTAGCGTAAATCGAATAACAGTAAACAACA
Matricaria chamomilla genome assembly, chromosome: 2.
OZ174297.1:7387729-7387748
TTGTTTGTTTACATTGTTTAAAAGAAGTGT7387729TGGAAAACCTGCACACTTTGATTAATATTTATCGAATAACGTAGATTAAT
Tanacetum vulgare genome assembly, chromosome: 3.
OZ183340.1:9311709-9311728
CAATTTGTGATTATTTTCGGTATTAACCGT9311709TGGAAAACCTGCACACTTTGTTAGTGTAAATCGAATAATAGTAAACGACA
Tanacetum vulgare genome assembly, chromosome: 7.
OZ183344.1:171856117-171856136
GTTTACACACAGAACCTGTTTTAAGACTGT171856117TGGAAAACCTGCACACTTTGTTAATATAAATCGAATAAACGTAACAACGT
Musa banksii genome assembly, chromosome: 11.
OZ184662.1:31961333-31961352
GCATCACTACTGCAGCAGCAAAAACTTTCA31961333TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTGCTACATGGACG
Musa acuminata var. zebrina genome assembly, chromosome: 11.
OZ184685.1:40555825-40555844
GCATCACTACTGCAGCAGCAAAAACTTTCA40555825TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTGCTACATGGACG
Musa hybrid cultivar genome assembly, chromosome: 11.
OZ185490.1:33076722-33076741
GCATCACTACTGCAGCAACAAAAACTTTCA33076722TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTACTACATGGACA
Musa hybrid cultivar genome assembly, chromosome: 11.
OZ185502.1:33292168-33292187
GCATCACTACTGCAGCAACAAAAACTTTCA33292168TGGAAAACCTGCACACTTTGTAAACACTTAATAAAGGTACTACATGGACA
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 11.
OZ193596.1:32186904-32186923
GCATCACTACTGCAGCAGCAAAAACTTTCA32186904TGGAAAACCTGCACACTTTGTAAACACTTAATAGAAGTACTACATGGACG
Echinopora horrida genome assembly, chromosome: 6.
OZ118734.1:26233544-26233563
AAAAAAAGAGCTGGACTTGTCACCTATATT26233544TGGAAAACCTGCACACTTTGCAAAACATCTGTCCCTCCTCTTCATTGTAA
Scleropages formosus genome assembly, chromosome: 3.
LR584068.1:25926676-25926695
TCCTGTGGTTATTAGCATTTTAAATAAAGC25926676TGGAAAACCTGCACACTTTGTAACTGACCAGGACCAAGGACTGCCACTGT
Caprimulgus europaeus genome assembly, chromosome: 3.
OU015525.1:93874586-93874605
AGGGGAAGAGGAAAAAAACCCAAACAAACC93874586TGGAAAACCTGCACACTTTGCAGCTGGAGAGAGGAGTGAGAAGATGTGAG
Zea mays chromosome 4 clone ZMMBBb-251C2; ZMMBBb0251C02, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces.
AC186411.3:173040-173059
TATGGCTCCAAAATGAATAGTCTTCTCCAT173040CAAAGTGTGCAGGTTTTCCAAGGGGAATTGATAGTAAATGCGCATTTGAA
Matricaria chamomilla var. recutita genome assembly, chromosome: 6_2.
OY720581.1:4794104-4794123
CATTGTTACTGTTATTCGGTTTATACTAAT4794104CAAAGTGTGCAGGTTTTCCAACAGTAATCGGCAATAACATGAAATAAATA
Matricaria chamomilla var. recutita genome assembly, chromosome: 2.
OY992047.1:326229690-326229709
TACTAATCAAAGTGACACGGTTTAACTAAT326229690CAAAGTGTGCAGGTTTTCCAACAAGTTTACCCGAGAAGGCAAATTTTTTT
Matricaria chamomilla var. recutita genome assembly, chromosome: 6.
OY992051.1:5593127-5593146
CATTGTTACTGTTATTCGGTTTATACTAAT5593127CAAAGTGTGCAGGTTTTCCAACAGTAATCGGCAATAACATGAAATAAATA
Zea mays subsp. mays genome assembly, chromosome: 2.
OZ119277.1:118439852-118439871
TATGGCTCCAAAATGAGTAATCCTCTCCAT118439852CAAAGTGTGCAGGTTTTCCAAGAGGAATAGAAAGTAAATGGGCATTTGAA
Nemophora metallica genome assembly, chromosome: 6.
OZ180161.1:2316103-2316122
CCATAAGGTCTTTTATATATTTTCGTAGTA2316103CAAAGTGTGCAGGTTTTCCACAGTGATTTCCATTACCAGTGTTTTGGGAA
Geotrypetes seraphini genome assembly, chromosome: 1.
LR699146.1:343355832-343355851
TTTCAAATGGAAATTCTTCCCTTTGAAAAT343355832CAAAGTGTGCAGGTTTTCCATTTACATTGTTTGAAAATTGTCCTTGAAGG
Lissotriton helveticus genome assembly, chromosome: 2_1.
OZ180044.1:325167238-325167257
AGCAAGGCGTACTTGTGATCAATACTGCTG325167238CAAAGTGTGCAGGTTTTCCACAATGGAACCACTCATCTCACACGGAAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGAAAACCTGCACACTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAAAACCTGCACACTTTG | format : html | download : | debug : 

0.013 | 0.013 | search_start;
0.161 | 0.148 | search_plus_done; http://172.18.8.135:50800/match?q=TGGAAAACCTGCACACTTTG&k=0&no_gap=0&offset=0&limit=50
0.226 | 0.065 | search_minus_done; http://172.18.8.135:50800/match?q=CAAAGTGTGCAGGTTTTCCA&k=0&no_gap=0&offset=0&limit=19
0.236 | 0.009 | cgi_end;

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