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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:57:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scleropages formosus genome assembly, chromosome: 3.
LR584068.1:25926676-25926695
TCCTGTGGTTATTAGCATTTTAAATAAAGC25926676TGGAAAACCTGCACACTTTGTAACTGACCAGGACCAAGGACTGCCACTGT
Caprimulgus europaeus genome assembly, chromosome: 3.
OU015525.1:93874586-93874605
AGGGGAAGAGGAAAAAAACCCAAACAAACC93874586TGGAAAACCTGCACACTTTGCAGCTGGAGAGAGGAGTGAGAAGATGTGAG
Zea mays cultivar B73 chromosome 5 clone CH201-342E5, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC185656.4:39516-39535
TTCAAATGCGCATTTACTATCAATTCCCCT39516TGGAAAACCTGCACACTTTGATGGAGAGGACTATTCATTTTGGAGCCATA
Zea mays cultivar B73 chromosome 4 clone ZMMBBb-111A22, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces.
AC195196.4:146372-146391
TTCAAATGCGCATTTACTATCAATTCCCCT146372TGGAAAACCTGCACACTTTGATGGAGAAGACTATTCATTTTGGAGCCATA
Zea mays cultivar B73 chromosome 5 clone CH201-501I18, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC234188.4:202739-202758
TTCAAATGCGCATTTACTATCAATTCCCCT202739TGGAAAACCTGCACACTTTGATGGAGAGGACTATTCATTTTGGAGCCATA
Zea mays cultivar LT2357 chromosome 4.
CP116742.1:221964037-221964056
TTCAAATGCGCATTTACTATCAATTCCCCT221964037TGGAAAACCTGCACACTTTGATGGAGAAGACTATTCATTTTGGAGCCATA
Musa acuminata subsp. malaccensis isolate AA chromosome 11.
CP126380.1:34062096-34062115
GCATCACTACTGCAGCAGCAAAAACTTTCA34062096TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTGCTACATGGACG
Musa acuminata subsp. malaccensis isolate AA chromosome 22.
CP126391.1:33472953-33472972
GCATCACTACTGCAGCAGCAAAAACTTTCA33472953TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTGCTACATGGACG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A11.
HG996475.1:33873214-33873233
GCATCACTACTGCAGCAGCAAAAACTTTCA33873214TGGAAAACCTGCACACTTTGTAAACACTTAATAGAAGTACTACATGGACG
Zea mays genome assembly, chromosome: 4.
LR897970.1:222157176-222157195
TTCAAATGCGCATTTACTATCAATTCCCCT222157176TGGAAAACCTGCACACTTTGATGGAGAAGACTATTCATTTTGGAGCCATA
Musa schizocarpa genome assembly, chromosome: S11.
LS990925.1:36167497-36167516
GCATCACTACTGCAGCAACAAAAACTTTCA36167497TGGAAAACCTGCACACTTTGTAAACACTTAATAAAAGTACTACATGGACA
Geotrypetes seraphini genome assembly, chromosome: 1.
LR699146.1:343355832-343355851
TTTCAAATGGAAATTCTTCCCTTTGAAAAT343355832CAAAGTGTGCAGGTTTTCCATTTACATTGTTTGAAAATTGTCCTTGAAGG
Zea mays chromosome 4 clone ZMMBBb-251C2; ZMMBBb0251C02, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces.
AC186411.3:173040-173059
TATGGCTCCAAAATGAATAGTCTTCTCCAT173040CAAAGTGTGCAGGTTTTCCAAGGGGAATTGATAGTAAATGCGCATTTGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGAAAACCTGCACACTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAAAACCTGCACACTTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.245 | 0.237 | search_plus_done; http://172.18.8.135:50400/match?q=TGGAAAACCTGCACACTTTG&k=0&no_gap=0&offset=0&limit=50
0.343 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAGTGTGCAGGTTTTCCA&k=0&no_gap=0&offset=0&limit=39
0.345 | 0.002 | cgi_end;

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