GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 10:56:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 6, clone: LjT15B22, TM0632.
AP010031.1:41786-41810
AATATAGTATAAATATCTGTCAAAAAAAAG41786TGGAAACTATATAATTTTATGTTCACAAGTAAATTAATTTTCTATATATATATAT
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:44065680-44065704
ATATATATATATAGAAAATTAATTTACTTG44065680TGAACATAAAATTATATAGTTTCCACTTTTTTTTGACAGATATTTATACTATATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGAAACTATATAATTTTATGTTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAAACTATATAATTTTATGTTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=TGGAAACTATATAATTTTATGTTCA&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TGAACATAAAATTATATAGTTTCCA&k=0&no_gap=0&offset=0&limit=49
0.112 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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