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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 14:40:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EC2BBA25CE07.g1 Xenopus tropicalis xtbs plasmid library Xenopus tropicalis cDNA clone xtbs25J13 5', mRNA sequence.
CN085422.1:283-302
TCCCCACACTGCACATCTGGAAGCCGAGAG283TGGAAGGACCTCGAAGACCGGCTTGGAGTCTCAGACAGCAAAACTCTTTT
TL002H08 Young leaf cDNA library of tea plant (Camellia sinensis) Camellia sinensis cDNA clone TL002H08 5', mRNA sequence.
CV013624.1:532-551
GAAGGCGATCGAGAAGGTCGGATCGAGCTC532TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGGTCAGATTTCT
TL003G11 Young leaf cDNA library of tea plant (Camellia sinensis) Camellia sinensis cDNA clone TL003G11 5', mRNA sequence.
CV013668.1:518-537
ACAGGCGATCGAGAAGGTCGGATCGAGCAC518TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
TL015H06 Young leaf cDNA library of tea plant (Camellia sinensis) Camellia sinensis cDNA clone TL015H06 5', mRNA sequence.
CV014185.1:519-538
GAAGGCGATCGAGAAGGTTGGATCGAGCAC519TGGAAGGACCTCGAAGACCGTGACGATCGCCGATT
TL017G05 Young leaf cDNA library of tea plant (Camellia sinensis) Camellia sinensis cDNA clone TL017G05 5', mRNA sequence.
CV014266.1:564-583
GAAGGGGATCGAGAAGGTCGGATCGAGCTC564TGGAAGGACCTCGAAGACCGTTACGATCGGTGATTGCGGTCAGATTTCTT
Camellia sinensis mRNA, clone: LR07G09, 5' end sequence, expressed in lateral roots.
FS943843.1:468-487
GAAGGCGATCGAGAAGGTTGGATCGAGCAC468TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: ML04D07, 5' end sequence, expressed in mature leaves.
FS945910.1:410-429
GAAGGCGATCGAGAAGGTTGGATCGAGCAC410TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: ML10D03, 5' end sequence, expressed in mature leaves.
FS946354.1:177-196
GAAGGCGATCGAGAAGGTTGGATCGAGCAC177TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: ML27B08, 5' end sequence, expressed in mature leaves.
FS947519.1:506-525
GAAGGCGATCGAGAAGGTTGGATCGAGCAC506TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: RT24B10, unspecified EST, sequenced using SP6 primer, expressed in roots.
FS949812.1:512-531
GAAGGCGATCGAGAATGTTGGATCGAGCAC512TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: RT4A01, unspecified EST, sequenced using T7 primer, expressed in roots.
FS951344.1:120-139
GAAGGCGATCGAGAAGGTCGGATCGAGCTC120TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
Camellia sinensis mRNA, clone: SS09F09, 5' end sequence, expressed in shoot stems.
FS952825.1:505-524
GAAGGCGATCGAGAAGGTTGGATCGAGCAC505TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: SS12C04, 5' end sequence, expressed in shoot stems.
FS953007.1:409-428
GAAGGCGATCGAGAAGGTTGGATCGAGCAC409TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: SS18D08, 5' end sequence, expressed in shoot stems.
FS953459.1:408-427
GAAGGCGATCGAGAAGGTTGGATCGAGCAC408TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TB09B04, 5' end sequence, expressed in terminal buds.
FS955027.1:511-530
GAAGGCGATCGAGAAGGTTGGATCGAGCAC511TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TB09B07, 5' end sequence, expressed in terminal buds.
FS955030.1:508-527
GAAGGCGATCGAGAAGGTTGGATCGAGCAC508TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TB13G07, 5' end sequence, expressed in terminal buds.
FS955385.1:488-507
GAAGGCGATCGAGAAGGTTGGATCGAGCAC488TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TB20E08, 5' end sequence, expressed in terminal buds.
FS955875.1:506-525
GAAGGCGATCGAGAAGGTTGGATCGAGCAC506TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TB22B02, 5' end sequence, expressed in terminal buds.
FS955979.1:409-428
GAAGGCGATCGAGAAGGTTGGATCGAGCAC409TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TB24B06, 5' end sequence, expressed in terminal buds.
FS956105.1:507-526
GAAGGCGATCGAGAAGGTTGGATCGAGCAC507TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TB25D06, 5' end sequence, expressed in terminal buds.
FS956187.1:507-526
GAAGGCGATCGAGAAGGTTGGATCGAGCAC507TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TB26H04, 5' end sequence, expressed in terminal buds.
FS956299.1:412-431
GAAGGCGATCGAGAAGGTTGGATCGAGCAC412TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TR02C09, 5' end sequence, expressed in tap roots.
FS956677.1:505-524
GAAGGCGATCGAGAAGGTTGGATCGAGCAC505TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: TR16G04, 5' end sequence, expressed in tap roots.
FS957609.1:511-530
GAAGGCGATCGAGAAGGTCGGATCGAGCAC511TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: YL02F08, 5' end sequence, expressed in young leaves.
FS958660.1:408-427
GAAGGCGATCGAGAAGGTTGGATCGAGCAC408TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: YL07D06, 5' end sequence, expressed in young leaves.
FS959045.1:515-534
GAAGGCGATCGAGAAGGTTGGATCGAGCAC515TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: YL11B12, 5' end sequence, expressed in young leaves.
FS959344.1:25-44
GATCGAGAAGGTCGGATCGAGCTC25TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
Camellia sinensis mRNA, clone: YL14F02, 5' end sequence, expressed in young leaves.
FS959592.1:412-431
GAAGGCGATCGAGAAGGTTGGATCGAGCAC412TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: YL18G12, 5' end sequence, expressed in young leaves.
FS959919.1:509-528
GAAGGCGATCGAGAAGGTTGGATCGAGCAC509TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: YL20A05, 5' end sequence, expressed in young leaves.
FS960011.1:510-529
GAAGGCGATCGAGAAGGTTGGATCGAGCAC510TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: YL22D11, 5' end sequence, expressed in young leaves.
FS960194.1:474-493
GAAGGCGATCGAGAAGGTTGGATCGAGCAC474TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis mRNA, clone: YL26A10, 5' end sequence, expressed in young leaves.
FS960438.1:482-501
GAAGGTGATCGAGAAGGTTGGATCGAGCAC482TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST0665 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_03_08.M13+_H01.ab1, mRNA sequence.
GE650338.1:553-572
GAAGGCGATCGAGAAGGTCGGATCGAGCTC553TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
EST0813 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_05_12.M13+_D02.ab1, mRNA sequence.
GE650486.1:552-571
GAAGGCGATCGAGAAGGTCGGATCGAGCTC552TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
EST0909 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_06_44.M13+_D06.ab1, mRNA sequence.
GE650582.1:550-569
GAAGGCGATCGAGAAGGTCGGATCGAGCTC550TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
EST0918 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_06_54.M13+_F07.ab1, mRNA sequence.
GE650591.1:552-571
GAAGGCGATCGAGAAGGTCGGATCGAGCTC552TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
EST0932 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_06_73.M13+_A10.ab1, mRNA sequence.
GE650605.1:549-568
GAAGGCGATCGAGAAGGTCGGATCGAGCTC549TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
EST0949 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_07_01.M13+_A01.ab1, mRNA sequence.
GE650622.1:550-569
GAAGGCGATCGAGAAGGTCGGATCGAGCTC550TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
EST0992 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_07_60.M13+_D08.ab1, mRNA sequence.
GE650665.1:533-552
GAAGGCGATCGAGAAGGTTGGATCGAGCAC533TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST1028 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_08_09.M13+_A02.ab1, mRNA sequence.
GE650701.1:552-571
GAAGGCGATCGAGAAGGTCGGATCGAGCTC552TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
EST1112 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_09_24.M13+_H03.ab1, mRNA sequence.
GE650785.1:516-535
GAAGGCGATCGAGAAGGTTGGATCGAGCAC516TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST1204 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_10_39.M13+_G05.ab1, mRNA sequence.
GE650877.1:519-538
GAAGGCGATCGAGAAGGTCGGATCGAGCTC519TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
EST1403 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_13_11.M13+_C02.ab1, mRNA sequence.
GE651076.1:533-552
GAAGGCGATCGAGAAGGTTGGATCGAGCAC533TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST1519 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_14_58.M13+_B08.ab1, mRNA sequence.
GE651192.1:385-404
GAAGGCGATCGAGAAGGTTGGATCGAGCAC385TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST1521 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_14_60.M13+_D08.ab1, mRNA sequence.
GE651194.1:215-234
GAAGGCGATCGAGAAGGTTGGATCGAGCAC215TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCTGTCAGCTCGCTT
EST1533 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_14_75.M13+_C10.ab1, mRNA sequence.
GE651206.1:385-404
GAAGGCGATCGAGAAGGTTGGATCGAGCAC385TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST1544 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_14_87.M13+_G11.ab1, mRNA sequence.
GE651217.1:533-552
GAAGGCGATCGAGAAGGTTGGATCGAGCAC533TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST1560 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_15_12.M13+_D02.ab1, mRNA sequence.
GE651233.1:531-550
GAAGGCGATCGAGAAGGTTGGATCGAGCAC531TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST1605 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_15_77.M13+_E10.ab1, mRNA sequence.
GE651278.1:530-549
GAAGGCGATCGAGAAGGTTGGATCGAGCAC530TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
EST1942 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_20_08.M13+_H01.ab1, mRNA sequence.
GE651615.1:532-551
GAAGGCGATCGAGAAGGTTGGATCGAGCAC532TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
TSA: Pyrus communis mRNA, contig: lc19733.
FX628255.1:322-341
GAAGGCGATCGAGAAGGTCGGATCGAGCTC322TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
TSA: Camellia sinensis tea_rep_c2 mRNA sequence.
KA279445.1:500-519
GAAGGCGATCGAGAAGGTTGGATCGAGCAC500TGGAAGGACCTCGAAGACCGTGACGATCGCCAATTGCGGTCAGCTCGCTT
TSA: Camellia sinensis tea_rep_c47 mRNA sequence.
KA279490.1:514-533
GAAGGCGATCGAGAAGGTCGGATCGAGCTC514TGGAAGGACCTCGAAGACCGTTACGATCGCTGATTGCGGTCAGATTTCTT
TSA: Camellia sinensis tea_s23586 mRNA sequence.
KA301984.1:273-292
GAAGGCGATCGAGAAGGTTGGATCGAGCAC273TGGAAGGACCTCGAAGACCGTGACGATCGCCAATTGCGGTCAGCTCGCTT
TSA: Camellia sinensis tea_rep_c24537 mRNA sequence.
KA302889.1:357-376
GAAGGCGATCGAGAAGGTTGGATCGAGCAC357TGGAAGGACCTCGAAGACCGTGACGATCGCCGATTGCGGTCAGCTCGCTT
Camellia sinensis clone U10BcDNA 2876.
HM003317.1:439-458
GAAGGCGATCGAGAAGGTTGGATCGAGCAC439TGGAAGGACCTCGAAGACCGTGACGATCGCCAATTGCGGTCAGCTCGCTT
Dicrocoelium dendriticum genome assembly, chromosome: 2.
OX104064.1:24622141-24622160
GGGCTCCCGCTAAATTTGGGACCCTGAAGT24622141TGGAAGGACCTCGAAGACCGGTATTTCGAAATTTTATCCGGTGAGCTCGT
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: II.
OX377202.1:84314398-84314417
AAAGGTGTAACGAATATAAAGGCAGATCTA84314398TGGAAGGACCTCGAAGACCGGCTTCAACGGAAGTGTCGTTCCGTTTTTCG
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: II.
OX377202.1:84363657-84363676
AAAGGTGTAACGAACATAAAGGCAGATCTA84363657TGGAAGGACCTCGAAGACCGGCTTCAACGGAAGTGTCGTTCCGTTTTTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGAAGGACCTCGAAGACCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAAGGACCTCGAAGACCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
4.019 | 4.010 | search_plus_done; http://172.18.8.135:50400/match?q=TGGAAGGACCTCGAAGACCG&k=0&no_gap=0&offset=0&limit=50
4.142 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=CGGTCTTCGAGGTCCTTCCA&k=0&no_gap=0&offset=0&limit=0
4.142 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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