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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-05 21:01:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Heterocephalus glaber genome assembly, chromosome: 8.
OX090916.1:42801205-42801224
CCCCATCTTGCTCACCTTGCAAGACTGAGC42801205TGGAATCCCCTCCTTCTCTTCTAGGAAGCCTCTGGTCCCTACATGCATAT
Heterocephalus glaber genome assembly, chromosome: 6.
OZ001071.1:89272589-89272608
CCCCATCTTGCTCACCTTGCAAGACTGAGC89272589TGGAATCCCCTCCTTCTCTTCTAGGAAGCCTCTGGTCCCTACATGCATAT
Heterocephalus glaber genome assembly, chromosome: 6.
OZ001114.1:88405728-88405747
CCCCATCTTGCTCACCTTGCAAGACTGAGC88405728TGGAATCCCCTCCTTCTCTTCTAGGAAGCCTCTGGTCCCTACATGCATAT
Felis catus Senzu DNA, chromosome: B3, American Shorthair breed.
AP023157.1:67224029-67224048
ATGCCTATTCTTCTTGTCTCCAGCCCCACC67224029TGGAATCCCCTCCTTCTCTTTGATCCAATCACACTGCTCTTTTTTATGGT
1287609 NCCCWA 03RT Oncorhynchus mykiss cDNA clone 03RT121L14 5', mRNA sequence.
CX147600.1:405-424
TCCACTGTAGATTAGTCTTTGTTGTTGAGG405TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
1291057 NCCCWA 03RT Oncorhynchus mykiss cDNA clone 03RT126F10 5', mRNA sequence.
CX150707.1:408-427
TCCACTGTAGATTAGTCTTTGTTGTTGAGG408TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
1291173 NCCCWA 03RT Oncorhynchus mykiss cDNA clone 03RT126H20 5', mRNA sequence.
CX150819.1:406-425
TCCACTGTAGATTAGTCTTTGTTGTTGAGG406TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
1291311 NCCCWA 03RT Oncorhynchus mykiss cDNA clone 03RT126K17 5', mRNA sequence.
CX150949.1:406-425
TCCACTGTAGATTAGTCTTTGTTGTTGAGG406TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
1333634 NCCCWA 07RT Oncorhynchus mykiss cDNA clone 07RT102H11 3', mRNA sequence.
CX717153.1:383-402
TCCACTGTAGATTAGTCTTTGTTGTTGAGG383TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
Rainbow trout multi-tissues library (resequencing) (tccn) clone tcbi0012.h.08, 5prim end (ADAPT_5).
FP322518.1:388-407
TCCACTGTAAATTAGTCTTTGTTGTTGAGG388TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
EST_omyk_evn_820250 omykevn RBC Oncorhynchus mykiss cDNA Oncorhynchus mykiss cDNA clone omyk_evn_501_314 3', mRNA sequence.
GE821253.1:266-285
TCCACTGTAGATTAGTCTTTGTTGTTGAGG266TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
EST_omyk_evn_831920 omykevn RBC Oncorhynchus mykiss cDNA Oncorhynchus mykiss cDNA clone omyk_evn_503_272 3', mRNA sequence.
GE822615.1:266-285
TCCACTGTAGACTAGTCTTTGTTGTTGAGG266TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
EST_omyk_evn_831570 omykevn RBC Oncorhynchus mykiss cDNA Oncorhynchus mykiss cDNA clone omyk_evn_505_306 3', mRNA sequence.
GE824117.1:266-285
TCCACTGTAGATTAGTCTTTGTTGTTGAGG266TGGAATCCCCTCCTTCTCTTCCACTCTTTCTTTAATTCTCTCCACCTTGT
Heterocephalus glaber genome assembly, chromosome: 8.
OX090948.1:29229123-29229142
ATATGCATGTAGGGACCAGAGGCTTCCTAG29229123AAGAGAAGGAGGGGATTCCAGCTCAGTCTTGCAAGGTGAGCAAGATGGGG
Oncorhynchus mykiss clone omyk-evn-501-314 NEDD8 precursor putative mRNA, complete cds.
BT073010.1:179-198
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG179AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
Oncorhynchus mykiss clone omyk-evn-505-306 NEDD8 precursor putative mRNA, complete cds.
BT073397.1:206-225
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG206AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout normalized testis library (tcbi) clone tcbi0012.h.08, 5prim end (M13R primer).
BX858854.3:170-189
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG170AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues - normalized + 1 subtraction (tcba) clone tcba0006.n.19, 5prim end (M13R primer).
BX860421.3:185-204
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG185AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues-normalized + 2 subtractions (tcbk) clone tcbk0023.p.20, 5prim end (M13R primer).
BX875530.3:194-213
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG194AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues-normalized + 2 subtractions (tcbk) clone tcbk0062.i.20, 5prim end (M13R primer).
BX880890.3:187-206
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG187AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues-normalized + 2 subtractions (tcbk) clone tcbk0032.c.13, 5prim end (M13R primer).
BX883456.3:201-220
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG201AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues-normalized + 2 subtractions (tcbk) clone tcbk0038.h.23, 5prim end (M13R primer).
BX884091.3:201-220
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG201AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues-normalized + 2 subtractions (tcbk) clone tcbk0033.d.03, 5prim end (M13R primer).
BX886978.3:146-165
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG146AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues-normalized + 2 subtractions (tcbk) clone tcbk0041.l.16, 5prim end (M13R primer).
BX889957.3:178-197
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG178AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues-normalized + 2 subtractions (tcbk) clone tcbk0067.h.12, 5prim end (M13R primer).
BX909627.3:201-220
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG201AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout normalized testis library (tcbi) clone tcbi0040.d.19, 5prim end (5 primer).
CR368795.2:178-197
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG178AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout normalized testis library (tcbi) clone tcbi0021.f.06, 5prim end (5 primer).
CR370647.2:144-163
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG144AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout normalized testis library (tcbi) clone tcbi0033.i.21, 5prim end (5 primer).
CR370872.2:170-189
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG170AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
AGENAE Rainbow trout multi-tissues library (tcce) clone tcbk0032.c.13, 3prim end (3 primer).
CU073514.1:201-220
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG201AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
1287608 NCCCWA 03RT Oncorhynchus mykiss cDNA clone 03RT121L14 3', mRNA sequence.
CX147599.1:181-200
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG181AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
1291056 NCCCWA 03RT Oncorhynchus mykiss cDNA clone 03RT126F10 3', mRNA sequence.
CX150706.1:206-225
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG206AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
1291172 NCCCWA 03RT Oncorhynchus mykiss cDNA clone 03RT126H20 3', mRNA sequence.
CX150818.1:181-200
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG181AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
1291310 NCCCWA 03RT Oncorhynchus mykiss cDNA clone 03RT126K17 3', mRNA sequence.
CX150948.1:181-200
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG181AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
1333635 NCCCWA 07RT Oncorhynchus mykiss cDNA clone 07RT102H11 5', mRNA sequence.
CX717154.1:202-221
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG202AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
Rainbow trout multi-tissues library (resequencing) (tccn) clone tcbi0012.h.08, 5prim end (ADAPT_5).
FP322806.1:170-189
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG170AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
Dianthus caryophyllus mRNA, clone: CES05E09, 5' end sequence.
FY384086.1:179-198
ACACAATCGACAATTTGAAATCGAAGATTC179AAGAGAAGGAGGGGATTCCAGCGGATCAACAAAGGCTAATCTTCGCTGGA
EST_omyk_evn_827738 omykevn RBC Oncorhynchus mykiss cDNA Oncorhynchus mykiss cDNA clone omyk_evn_501_314 5', mRNA sequence.
GE821252.1:179-198
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG179AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
EST_omyk_evn_808112 omykevn RBC Oncorhynchus mykiss cDNA Oncorhynchus mykiss cDNA clone omyk_evn_503_272 5', mRNA sequence.
GE822614.1:390-409
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG390AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAGTCTACAGTGGA
EST_omyk_evn_805074 omykevn RBC Oncorhynchus mykiss cDNA Oncorhynchus mykiss cDNA clone omyk_evn_505_306 5', mRNA sequence.
GE824116.1:206-225
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG206AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
TSA: Oncorhynchus mykiss 1557.Onmycontig, mRNA sequence.
EZ764891.1:203-222
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG203AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
TSA: Oncorhynchus mykiss 59966.Onmycontig, mRNA sequence.
EZ823300.1:514-533
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG514AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
TSA: Oncorhynchus mykiss mRNA, contig: O_myk_c854.
FX113602.1:220-239
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG220AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
TSA: Oncorhynchus mykiss mRNA, contig: YGL02.5321.C1.
FX355573.1:267-286
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG267AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
TSA: Oncorhynchus mykiss mRNA, contig: YGL02.5321.C3.
FX355575.1:250-269
ACAAGGTGGAGAGAATTAAAGAAAGAGTGG250AAGAGAAGGAGGGGATTCCACCTCAACAACAAAGACTAATCTACAGTGGA
TSA: Dianthus superbus Ds_CL4412Contig1 mRNA sequence.
JL392205.1:176-195
ACACAATCGACAATTTGAAATCGAAGATTC176AAGAGAAGGAGGGGATTCCAGCGGATCAACAGCGGCTAATCTTCGCTGGA
TSA: Plecoglossus altivelis SeqIndex0001211.Plalmacro mRNA sequence.
JP723385.1:233-252
ATAAGGTGGAAAGAATTAAAGAGAGAGTGG233AAGAGAAGGAGGGGATTCCACCCCAACAGCAAAGGCTCATCTACAGTGGA
TSA: Plecoglossus altivelis altivelis mRNA, contig: Ayu_H13_contig3357.
LA741802.1:217-236
ATAAGGTGGAAAGAATTAAAGAGAGAGTGG217AAGAGAAGGAGGGGATTCCACCCCAACAGCAAAGGCTCATCTACAGTGGA
TSA: Plecoglossus altivelis altivelis mRNA, contig: Ayu_K1_contig5298.
LA766476.1:30-49
TAAGGTGGAAAGAATTAAAGAGAGAGTGG30AAGAGAAGGAGGGGATTCCACCCCAACAGCAAAGGCTCATCTACAGTGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGAATCCCCTCCTTCTCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAATCCCCTCCTTCTCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.080 | 1.071 | search_plus_done; http://172.18.8.135:50400/match?q=TGGAATCCCCTCCTTCTCTT&k=0&no_gap=0&offset=0&limit=50
2.840 | 1.760 | search_minus_done; http://172.18.8.135:50400/match?q=AAGAGAAGGAGGGGATTCCA&k=0&no_gap=0&offset=0&limit=37
2.863 | 0.023 | cgi_end;

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