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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:05:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 88 unordered pieces.
FJ789648.1:575318-575337
TGTTGAATCTGCGATTGCATAGTTGGTTCC575318TGGACCTGAAACTCAACAATTATATCCTTATAAAACATCACTTCCTTCCT
Brassica napus genome assembly, chromosome: A07.
HG994361.1:160903-160922
TGTTGAATCTGCGATTGCATAGTTGGTTCC160903TGGACCTGAAACTCAACAATTATATCCTTTTAAAACATCACTTCCTTCCT
Brassica napus genome assembly, chromosome: C07.
HG994371.1:607107-607126
TGTTGAATCTGCGATTGCATAGTTGGTTCC607107TGGACCTGAAACTCAACAATTATATCCTTATAAAACATCACTTCCTTCCT
Brassica rapa genome, scaffold: A07.
LR031574.1:188843-188862
TGTTGAATCTGCGATTGCATAGTTGGTTCC188843TGGACCTGAAACTCAACAATTATATCCTTATAAAACATCACTTCCTTCCT
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:2946522-2946541
TGTTGAATCTGCGATTGCATAGTTGGTTCC2946522TGGACCTGAAACTCAACAATTATATCCTTATAAAACATCACTTCCTTCCT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:190726-190745
TGTTGAATCTGCGATTGCATAGTTGGTTCC190726TGGACCTGAAACTCAACAATTATATCCTTATAAAACATCACTTCCTTCCT
Heteromyza rotundicornis genome assembly, chromosome: 4.
OX596013.1:58543065-58543084
ACGGCTTCGGTAAATTGCAATACAAATCGA58543065TGGACCTGAAACTCAACAATGGCACCATGAAGGTGAGCATGACGAGTTAC
MAG: Spirochaetes bacterium isolate bin100 chromosome.
CP070841.1:1184449-1184468
TCCAGTCGAAGCAGTAACCAAAGCAGTCTT1184449ATTGTTGAGTTTCAGGTCCATATACTTTCTCCTTCATTAATATGATTCCA
Brassica napus GSS, clone JBnB073C12, end read, primer SACL2(forward).
CU934538.1:363-382
AGGAAGGAAGTGATGTTTTATAAGGATATA363ATTGTTGAGTTTCAGGTCCAGGAACCAACTATGCAATCGCAGATTCAACA
Brassica napus GSS, clone JBnB073C13, end read, primer SACL2(forward).
CU934540.1:363-382
AGGAAGGAAGTGATGTTTTATAAGGATATA363ATTGTTGAGTTTCAGGTCCAGGAACCAACTATGCAATCGCAGATTCAACA
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:36219628-36219647
AGGAAGGAAGTGATGTTTTAAAAGGATATA36219628ATTGTTGAGTTTCAGGTCCAGGAACCAACTATGCAATCGCAGATTCAACA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:61142536-61142555
AGGAAGGAAGTGATGTTTTATAAGGATATA61142536ATTGTTGAGTTTCAGGTCCAGGAACCAACTATGCAATCGCAGATTCAACA
Sphenella marginata genome assembly, chromosome: 3.
OX608080.1:109047990-109048009
TTTGTTGTGTACACAATCAAAATAGTTGGC109047990ATTGTTGAGTTTCAGGTCCAATACGCAAAAAAAATGTGATTATGTAAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGACCTGAAACTCAACAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGACCTGAAACTCAACAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.361 | 0.352 | search_plus_done; http://172.18.8.135:50400/match?q=TGGACCTGAAACTCAACAAT&k=0&no_gap=0&offset=0&limit=50
0.492 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGTTGAGTTTCAGGTCCA&k=0&no_gap=0&offset=0&limit=43
0.496 | 0.004 | cgi_end;

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