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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 13:18:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 5, clone: LjT23J23, TM0428.
AP009974.1:30641-30660
ATTTTGGTCGCTTCAATTTGCAGTGCCAAG30641TGGACGAACATCTTGAGCAGGTTCATTATCTTCTTAATAAGACAATACAA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:11266631-11266650
ATTTTGGTCGCTTCAATTTGCAGTGCCAAG11266631TGGACGAACATCTTGAGCAGGTTCATTATCTTCTTAATAAGACAATACAA
Polytrichum commune genome assembly, chromosome: 5.
OX485807.1:29307248-29307267
GGATACAGTTCCATACAAAGCAACAAGAAA29307248CTGCTCAAGATGTTCGTCCACAAAATACTGGAGGTGTCTTGTTTTGATAG
Blastomussa wellsi genome assembly, chromosome: 9.
OX393569.1:22388582-22388601
ACAAGAATTCAAGTCAACCTTCAAAACAAC22388582CTGCTCAAGATGTTCGTCCATCCTCAAAATTCCCACAGAAACTCTCTCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGACGAACATCTTGAGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGACGAACATCTTGAGCAG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.233 | 0.225 | search_plus_done; http://172.18.8.135:50400/match?q=TGGACGAACATCTTGAGCAG&k=0&no_gap=0&offset=0&limit=50
0.330 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCTCAAGATGTTCGTCCA&k=0&no_gap=0&offset=0&limit=48
0.331 | 0.002 | cgi_end;

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