GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 11:14:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Anabas testudineus genome assembly, chromosome: 21.
LR132057.1:5615082-5615101
CAAGGCTGGCGACACCTGTTTCACTGTATC5615082TGGACTCACAACTCAGCCAGCTCTCTTCATCCCTCTACACCCTCCCCCAT
1061064137655_TR POTATO-F-03-40KB Solanum phureja genomic clone 1061064137655, genomic survey sequence.
GS676786.1:435-454
ACACTACAATCCCCTCTTTCCCTTTGGATT435TGGACTCACAACTCAGCCAGTGAAAATGAATTAGAACTAGGTATGTTATT
Solanum tuberosum cultivar Solyntus chromosome 6.
CP055239.1:60340855-60340874
ACACTACAATCCCCTCTTTCCCTTTGGATT60340855TGGACTCACAACTCAGCCAGTGAAAATGAATTAGAACTAGGTATGTTATT
Solanum verrucosum cultivar 11H23 chromosome 6.
CP133617.1:50296874-50296893
ACACTACAATCCCCTCTTTCCCTTTGGATT50296874TGGACTCACAACTCAGCCAGTGAAAATGAATTAGAACTAGGTATGTTATT
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:73922751-73922770
CCACTACAATCCCCTCTTTCCCTTTGGATT73922751TGGACTCACAACTCAGCCAGTGAAGATGAATTAATAGACAGTATTGATAC
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:73956284-73956303
CCACTACAATCCCCTCTTTCCCTTTGGATT73956284TGGACTCACAACTCAGCCAGTGAAGATGAATTAATAGACAGTATTGATAC
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:73975701-73975720
CCACTACAATCCCCTCTTTCCCTTTGGATT73975701TGGACTCACAACTCAGCCAGTGAAGATGAATTAATAGACAGTATTGATAC
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:74046234-74046253
CCACTACAATCCCCTCTTTCCCTTTGGATT74046234TGGACTCACAACTCAGCCAGTGAAGATGAATTAATAGACAGTATTGATAC
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:74053735-74053754
CCACTACAATCCCCTCTTTCCCTTTGGATT74053735TGGACTCACAACTCAGCCAGTGAAGATGAATTAATAGACAGTATTGATAC
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:74101381-74101400
CCACTACAATCCCCTCTTTCCCTTTGGATT74101381TGGACTCACAACTCAGCCAGTGAAGATGAATTAATAGACAGTATTGATAC
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:74137711-74137730
CCACTACAATCCCCTCTTTCCCTTTGGATT74137711TGGACTCACAACTCAGCCAGTGAAGATGAATTAATAGACAGTATTGATAC
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:74163488-74163507
CCACTACAATCCCCTCTTTCCCTTTGGATT74163488TGGACTCACAACTCAGCCAGTGAAGATGAATTAATAGACAGTATTGATAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGACTCACAACTCAGCCAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGACTCACAACTCAGCCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.131 | 0.122 | search_plus_done; http://172.18.8.135:50400/match?q=TGGACTCACAACTCAGCCAG&k=0&no_gap=0&offset=0&limit=50
0.153 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=CTGGCTGAGTTGTGAGTCCA&k=0&no_gap=0&offset=0&limit=38
0.153 | 0.000 | cgi_end;

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