GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-16 02:41:44, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Orcinus orca genome assembly, chromosome: 3.
OW443362.1:92781522-92781541
CTGCCTAACCCTGTGAATGCTGCTTGGAGA92781522TGGAGTACACAGTGGGGGAAATGACCTGCAATTAGAAGACCAAAAGATAA
Delphinus delphis genome assembly, chromosome: 3.
OX465328.1:80754759-80754778
CTGCCTAACCCTGTGAATGCTGCTTGGAGA80754759TGGAGTACACAGTGGGGGAAATGACCTGCAATTAGAAGACCAAAAGATAA
Vulpes vulpes genome assembly, chromosome: 11.
OZ067173.1:54181545-54181564
AAGCCCATGGATATACAGTATGGAGATAGA54181545TGGAGTACACAGTGGGGGAAGTTAGTTAATCATCTTGGAGCACATAGCAG
Vulpes vulpes genome assembly, chromosome: 11.
OZ067324.1:54153593-54153612
AAGCCCATGGATATACAGTATGGAGATAGA54153593TGGAGTACACAGTGGGGGAAGTTAGTTAATCATCTTGGAGCACATAGCAG
Lagenorhynchus acutus genome assembly, chromosome: 3.
OZ185458.1:83653024-83653043
CTGCCTAACCCTGTGAATGCTGCTTGGAGA83653024TGGAGTACACAGTGGGGGAAATGACCTGCAATTAGAAGACCAAAAGATAA
Cuc3_3_F02 Cucumber fruit development cDNA library Cucumis sativus cDNA, mRNA sequence.
DN910045.1:211-230
AATTCAATCGATAAAGCACCTCTTATGATA211TGGAGTACACAGTGGGGGAAAATTTTTAACCAAAAATAAATAAAAGAGAT
Cuc5_1_D09 Cucumber fruit development cDNA library Cucumis sativus cDNA, mRNA sequence.
DN910632.1:240-259
AATTCAATCGATAAAGCACCTCTTATGATA240TGGAGTACACAGTGGGGGAAAATTTTTAACCAAAAATAAATAAAAGAGAT
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_3038, mRNA sequence.
JW921207.1:259-278
AATTCAATCGATAAAGCACCTCTTATGATA259TGGAGTACACAGTGGGGGAAAATTTTTAACCAAAAATAAATAAAAGAGAT
Mesocentrotus franciscanus isolate Mf1 chromosome 9.
CP137674.1:22401555-22401574
GAAAATTGGTGAAGTTATGCTGAACATTCT22401555TGGAGTACACAGTGGGGGAAACCCCAGCTTCAAAGAACGATTGTTTGTGC
Lagenorhynchus albirostris genome assembly, chromosome: 3.
OX459074.1:92494875-92494894
TTATCTTTTGGTCTTCTAATTGCAGGTCAT92494875TTCCCCCACTGTGTACTCCATCTCCAAGCAGCATTCACAGGGTTAGGCAG
Balaenoptera acutorostrata genome assembly, chromosome: 2.
OX465351.1:96661798-96661817
TTATCTTTTGGTCTTCTAATTGCAGGTCAT96661798TTCCCCCACTGTGTACTCCATCTCCAAGCAGCATTCACAGGCTTAGGCAG
Stenella coeruleoalba genome assembly, chromosome: 3.
OX596387.1:92318256-92318275
TTATCTTTTGGTCTTCTAATTGCAGGTCAT92318256TTCCCCCACTGTGTACTCCATCTCCAAGCAGCATTCACAGGGTTAGGCAG
Globicephala melas genome assembly, chromosome: 3.
OY734041.1:92365681-92365700
TTATCTTTTGGTCTTCTAATTGCAGGTCAT92365681TTCCCCCACTGTGTACTCCATCTCCAAGCAGCATTCACAGGGTTAGGCAG
Phocoena phocoena genome assembly, chromosome: 3.
OZ004759.1:93314964-93314983
TTATCTTTTGGTCTTCTAATTGCAGGTCAT93314964TTCCCCCACTGTGTACTCCATCTCCAAGCAGCATTCACAGGGTTAGGCAG
Grampus griseus genome assembly, chromosome: 3.
OZ206315.1:92133880-92133899
TTATCTTTTGGTCTTCTAATTGCAGGTCAT92133880TTCCCCCACTGTGTACTCCATCTCCAAGCAGCATTCACAGGGTTAGGCAG
RG5_D07 Cucumber leaf Cucumis sativus cDNA, mRNA sequence.
CK085591.1:217-236
ATCTCTTTTATTTATTTTTGGTTAAAAATT217TTCCCCCACTGTGTACTCCATATCATAAGAGGTGCTTTATCGATTGAATT
csa01-1ms3-a12 Csa01 Cucumis sativus cDNA clone csa01-1ms3-a12 5', mRNA sequence.
CO995334.1:421-440
ATCTCTTTTATTTATTTTTGGTTAAACATT421TTCCCCCACTGTGTACTCCATATCATAAGAGGTGCTTTATCGATTGAATT
csa01-3ms1-h03 Csa01 Cucumis sativus cDNA clone csa01-3ms1-h03 5', mRNA sequence.
CO998468.1:259-278
ATCTCTTTTATTTATTTTTGGTTAAAAATT259TTCCCCCACTGTGTACTCCATATCATAAGAGGTGCTTTATCGATTGAATT
Cucumis sativus mRNA for arabinogalactan protein, complete cds.
AB029092.2:833-852
ATCTCTTTTATTTATTTTTGGTTAAAAATT833TTCCCCCACTGTGTACTCCATATCATAAGAGGTGCTTTATCGATTGAATT
Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds.
AB029147.1:833-852
ATCTCTTTTATTTATTTTTGGTTAAAAATT833TTCCCCCACTGTGTACTCCATATCATAAGAGGTGCTTTATCGATTGAATT
Eutreptiella sp. 'Long Island Sound 2002' genome assembly, chromosome: 8.
OZ038385.1:39413765-39413784
GTAGCGCGCCGGGCACGCGCTGGGCAAACA39413765TTCCCCCACTGTGTACTCCATTGGGGACACCAATGGGGGGACAGTCTTGA
Albinaria teres genome assembly, chromosome: 3.
OZ185646.1:15202867-15202886
GAAAACTTTTGTTGTCGATCAATACATTTT15202867TTCCCCCACTGTGTACTCCAGGGGCATTTCTTCACATACTCGTCTTAATA
Albinaria teres genome assembly, chromosome: 3.
OZ185646.1:15239500-15239519
GAAAACTTTTGTTGTCGATCAATACATTTT15239500TTCCCCCACTGTGTACTCCAGGGGCATTTCTTCACATACTCGTCTTAATA
Albinaria teres genome assembly, chromosome: 20.
OZ185663.1:11870711-11870730
GAAAACTTTTGTTGTCGATCAATACATTTT11870711TTCCCCCACTGTGTACTCCAGGGGCATTTCTTCACATACTCGTCTTAATA
Cetorhinus maximus genome assembly, chromosome: 7.
OZ077453.1:88410466-88410485
GTCACAAGAGTAACTATCACATTCCCCTGA88410466TTCCCCCACTGTGTACTCCATACCCCATGCCCCTCACAAAAAGCAGCCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGAGTACACAGTGGGGGAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAGTACACAGTGGGGGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.201 | 0.192 | search_plus_done; http://172.18.8.135:50800/match?q=TGGAGTACACAGTGGGGGAA&k=0&no_gap=0&offset=0&limit=50
0.324 | 0.123 | search_minus_done; http://172.18.8.135:50800/match?q=TTCCCCCACTGTGTACTCCA&k=0&no_gap=0&offset=0&limit=41
0.335 | 0.010 | cgi_end;

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