GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 13:58:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Rhinatrema bivittatum genome assembly, chromosome: 9.
LR584395.1:55096555-55096574
AGCTACTAGGTACTTCTAAATCCATTACTT55096555TATTTGGGATGCACACTCCAAACGATTTAACTCATTTCTGTAAGTTAAAC
Solanum melongena mRNA, clone: SmFL10A18, 3'end.
FS072809.1:211-230
AATCACTCTGCGAAATAAATTAGCTACACA211TATTTGGGATGCACACTCCACCTTCTGGATTTTGTTGTTCTTTCCATATC
Solanum melongena mRNA, clone: SmFL11F16, 3'end.
FS073757.1:211-230
AATCACTCTGCGAAATAAATTAGCTACACA211TATTTGGGATGCACACTCCACCTTCTGGATTTTGTTGTTCTTTCCATATC
Solanum melongena mRNA, clone: SmFL12P08, 3'end.
FS074889.1:213-232
AATCACTCTGCGAAATAAATTAGCTACACA213TATTTGGGATGCACACTCCACCTTCTGGATTTTGTTGTTCTTTCCATATC
Solanum melongena mRNA, clone: SmFL35B23, 3'end.
FS090240.1:200-219
AATCACTCTGCGAAATAAATTAGCTACACA200TATTTGGGATGCACACTCCACCTTCTGGATTTTGTTGTTCTTTCCATATC
Sarcophaga caerulescens genome assembly, chromosome: 5.
OV656868.1:79469694-79469713
ATTTATGCACCAGAGTCATTAAAAATTGAA79469694TATTTGGGATGCACACTCCATTTTTCAAACGCGTAAAAAATGTCGATGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGAGTGTGCATCCCAAATA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAGTGTGCATCCCAAATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.134 | 0.125 | search_plus_done; http://172.18.8.135:50400/match?q=TGGAGTGTGCATCCCAAATA&k=0&no_gap=0&offset=0&limit=50
0.769 | 0.635 | search_minus_done; http://172.18.8.135:50400/match?q=TATTTGGGATGCACACTCCA&k=0&no_gap=0&offset=0&limit=50
0.773 | 0.004 | cgi_end;

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