GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 17:33:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:54159795-54159814
ATTTTTTTTCCAGTAAAATACATTAGTAGA54159795TGGATCATATGTAGGAATGCAGATGGAGATTTTTTTTTTTTTCACTCATG
Lotus japonicus genomic DNA, chromosome 1, clone: LjT45O19, TM0174.
AP006097.1:11217-11236
CATGAGTGAAAAAAAAAAAAATCTCCATCT11217GCATTCCTACATATGATCCATCTACTAATGTATTTTACTGGAAAAAAAAA
Sambucus nigra genome assembly, chromosome: 14.
OX422220.1:368127460-368127479
CAGCTAAACAGTTTATCCCTCGTATGAAGA368127460GCATTCCTACATATGATCCATAAACTAAAAGCACACTTTGGTATATTATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGATCATATGTAGGAATGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGATCATATGTAGGAATGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=TGGATCATATGTAGGAATGC&k=0&no_gap=0&offset=0&limit=50
0.110 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=GCATTCCTACATATGATCCA&k=0&no_gap=0&offset=0&limit=49
0.111 | 0.001 | cgi_end;

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