GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:33:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Manihot esculenta mRNA, clone: CAS01_010_B12, 5'end.
DB923321.1:31-54
GATCGGATATCTTAAAAGAAGAAAGAGATA31TGGCAGAAGTGAAGCTCTTGAGGAGCTGGTCGAGTCCATATGGTTTGAGAGTGG
Manihot esculenta mRNA, clone: CAS01_022_D13, 5'end.
DB927698.1:31-54
GATAAGATATCTTAAAAGAAGAAAGAGATA31TGGCAGAAGTGAAGCTCTTGAGGAGCTGGTCGAGTCCATATGGTTTGAGAGTGG
Manihot esculenta mRNA, clone: CAS01_026_G19, 5'end.
DB929206.1:31-54
GATCAGATATCTTAAAAGAAGAAAGAGATA31TGGCAGAAGTGAAGCTCTTGAGGAGCTGGTCGAGTCCATATGGTTTGAGAGTGG
Manihot esculenta mRNA, clone: CAS01_029_G08, 5'end.
DB930288.1:28-51
GAGATATCTTAAAAGAAGAAAGAGATA28TGGCAGAAGTGAAGCTCTTGAGGAGCTGGTCGAGTCCATATGGTTTGAGAGTGG
Manihot esculenta mRNA, clone: CAS01_031_C11, 5'end.
DB930920.1:31-54
GATCAGATATCTTAAAAGAAGAAAGAGATA31TGGCAGAAGTGAAGCTCTTGAGGAGCTGGTCGAGTCCATATGGTTTGAGAGTGG
Manihot esculenta mRNA, clone: CAS01_037_P14, 5'end.
DB933441.1:46-69
CATCAGATATCTTAAAAGAAGAAAGAGATA46TGGCAGAAGTGAAGCTCTTGAGGAGCTGGTCGAGTCCATATGGTTTGAGAGTGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGCAGAAGTGAAGCTCTTGAGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGCAGAAGTGAAGCTCTTGAGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.301 | 0.292 | search_plus_done; http://172.18.8.135:50400/match?q=TGGCAGAAGTGAAGCTCTTGAGGA&k=0&no_gap=0&offset=0&limit=50
0.321 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTCAAGAGCTTCACTTCTGCCA&k=0&no_gap=0&offset=0&limit=44
0.321 | 0.000 | cgi_end;

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