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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 13:48:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-8321 Pericarp Coffea canephora cDNA clone cccp19m18 5', mRNA sequence.
DV672615.1:228-255
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT228CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CGN-33291 Leaf Coffea canephora cDNA clone cccl24n12 5', mRNA sequence.
DV690037.1:192-219
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT192CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCTGTTGTTCATTTTC
CGN-33635 Leaf Coffea canephora cDNA clone cccl24j8 5', mRNA sequence.
DV690296.1:225-252
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT225CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CGN-33946 Leaf Coffea canephora cDNA clone cccl18f2 5', mRNA sequence.
DV690527.1:234-261
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT234CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CGN-37161 Leaf Coffea canephora cDNA clone cccl26o23 5', mRNA sequence.
DV693087.1:82-109
CTTTAAAACTTCAGTGCAAAGAAAGAAAAT82CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CGN-41780 Leaf Coffea canephora cDNA clone cccl30k12 5', mRNA sequence.
DV696562.1:220-247
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT220CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CGN-41972 Leaf Coffea canephora cDNA clone cccl27p8 5', mRNA sequence.
DV696721.1:209-236
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT209CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CGN-42475 Leaf Coffea canephora cDNA clone cccl30h6 5', mRNA sequence.
DV697133.1:209-236
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT209CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CC-L01_006_B01 Coffea young leaves Coffea canephora cDNA clone CC-L01_006_B01, mRNA sequence.
EE192149.1:202-229
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT202CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CC-L01_023_F02 Coffea young leaves Coffea canephora cDNA clone CC-L01_023_F02, mRNA sequence.
EE193459.1:212-239
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT212CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CC-L01_050_F01 Coffea young leaves Coffea canephora cDNA clone CC-L01_050_F01, mRNA sequence.
EE194989.1:235-262
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT235CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
TransId-80782 CACAT36FLBUD Coffea arabica cDNA clone CACAT36FLBUD_Q3_10_D05_068.F similar to Symbol: None | ribosomal protein L1 family protein, ribosomal protein L1, S.oleracea, EMBL:SORPL1 | chr3:23
GR982900.1:214-241
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT214CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-LV8-097-C09-UT.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-097-C09-UT, mRNA sequence.
GT699010.1:230-257
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT230CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-LV9-001-G12-EZ.F Coffea arabica LV9 Coffea arabica cDNA clone CA00-XX-LV9-001-G12-EZ, mRNA sequence.
GT711245.1:53-80
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT53CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-FB4-025-F08-EQ.F Coffea arabica FB4 Coffea arabica cDNA clone CA00-XX-FB4-025-F08-EQ, mRNA sequence.
GT712847.1:243-270
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT243CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-FB4-012-C06-QH.F Coffea arabica FB4 Coffea arabica cDNA clone CA00-XX-FB4-012-C06-QH, mRNA sequence.
GT712848.1:254-281
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT254CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-SH2-047-C09-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-047-C09-EM, mRNA sequence.
GT716715.1:37-64
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT37CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-SH2-043-G04-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-043-G04-EM, mRNA sequence.
GT716716.1:26-53
GTTCTTCAGTGCAAAGAAAGAAAAT26CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-CS1-061-H06-AC.F Coffea arabica CS1 Coffea arabica cDNA clone CA00-XX-CS1-061-H06-AC, mRNA sequence.
GT723810.1:236-263
CTCTTGTTCTTCAGTGCAAAGAAAGAAAAT236CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-IC1-020-F11-EC.F Coffea arabica IC1 Coffea arabica cDNA clone CA00-XX-IC1-020-F11-EC, mRNA sequence.
GT731241.1:26-53
GTTCTTCAGTGCAAAGAAAGAAAAT26CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC
CA00-XX-IC1-015-G08-EC.F Coffea arabica IC1 Coffea arabica cDNA clone CA00-XX-IC1-015-G08-EC, mRNA sequence.
GT731242.1:26-53
GTTCTTCAGTGCAAAGAAAGAAAAT26CATCAGCAACGTCATCTTCATTAGGCCACTGGGGGGTTTCCTCCGATGGGTCATTTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGCCTAATGAAGATGACGTTGCTGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGCCTAATGAAGATGACGTTGCTGATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=TGGCCTAATGAAGATGACGTTGCTGATG&k=0&no_gap=0&offset=0&limit=50
1.573 | 1.404 | search_minus_done; http://172.18.8.135:50400/match?q=CATCAGCAACGTCATCTTCATTAGGCCA&k=0&no_gap=0&offset=0&limit=50
1.587 | 0.014 | cgi_end;

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