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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:28:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdfw2017m02.y1 Mdfw Malus domestica cDNA clone Mdfw2017m02 5' similar to TR:P94078 P94078 ALPHA-MANNOSIDASE, mRNA sequence.
CN490636.1:186-205
AGATTGGAGAAGACAAAGACTATTCTGTAC186TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGATCAGCAAA
B010 Apple leaf cDNA library Malus domestica cDNA 3' similar to geraniol-responsible factor 15, mRNA sequence.
DN626093.1:204-223
AGATTGGAGAAGACAAAGACTATTCTGTAC204TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGATCAGCAAA
fl_08H04 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD255031.1:3-22
AC3TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGATCAGCAAA
TSA: Pyrus pyrifolia mRNA, contig: contig_12442revcomp.
FX410965.1:240-259
AGATTGGAGAAGACAAAGACTATTCTGTAC240TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGATCAGCAAA
TSA: Pyrus communis mRNA, contig: lc14117.
FX622691.1:168-187
AGATTGGAGAAGACAAAGACTATTCTGTAC168TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGATCAGCAAA
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143366.1:315283-315302
AGATTGGAGAAGACAAAGACTATTCTGTAC315283TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAAGCA
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143383.1:229644-229663
AGATTGGAGAAGACAAGGACTATTCTGTAC229644TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAATCA
Malus sylvestris genome assembly, chromosome: 9.
OU696511.1:276177-276196
AGATTGGAGAAGACAAAGACTATTCTGTAC276177TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAAGCA
Malus domestica genome assembly, chromosome: 9.
OU696685.1:274667-274686
AGATTGGAGAAGACAAAGACTATTCTGTAC274667TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAAGCA
Malus domestica genome assembly, chromosome: 9.
OU744550.1:306060-306079
AGATTGGAGAAGACAAAGACTATTCTGTAC306060TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAAGCA
Malus domestica genome assembly, chromosome: 9.
OU744961.1:282255-282274
AGATTGGAGAAGACAAAGACTATTCTGTAC282255TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAAGCA
Malus domestica genome assembly, chromosome: 9.
OU744999.1:272888-272907
AGATTGGAGAAGACAAAGACTATTCTGTAC272888TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAAGCA
Malus x robusta genome assembly, chromosome: 8.
OY720332.1:263837-263856
AGATTGGAGAAGACAAAGACTATTCTGTAC263837TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAAGCA
Pyrus communis genome assembly, chromosome: 7.
OY757074.1:182262-182281
AGATTGGAGAAGACAAAGACTATTCTGTAC182262TGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGGTAAAAGCA
Mdlr7001H09.g1 Apple_EST_Mdlr Malus domestica cDNA similar to ref|NP_189306.1| glycosyl hydrolase family 38 (alpha-mannosidase) [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis th
DT001709.1:484-503
TTTGCTGATCTTCTTTGTTGGGAACAACTT484CTTTAGTTCCACATTCGCCAGTACAGAATAGTCTTTGTCTTCTCCAATCT
Pyrus pyrifolia mRNA, clone: NFR3_26_66, 3' end sequence, expressed in fruit.
HX741027.1:548-567
TTTGCTGATCTTCTTTGTTGGGAACAACTT548CTTTAGTTCCACATTCGCCAGTACAGAATNGTCTTTGTCTTCTCCAATCT
TSA: Pyrus x bretschneideri Unigene10182_XinShao mRNA sequence.
JR605241.1:539-558
TTTGCTGATCTTCTTTGTTGGGAACAACTT539CTTTAGTTCCACATTCGCCAGTACAGAATAGTCTTTGTCTTCTCCAATCT
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141918.1:34424999-34425018
TGCTTTTACCTTCTTTGTTGGGAACAACTT34424999CTTTAGTTCCACATTCGCCAGTACAGAATAGTCTTTGTCTTCTCCAATCT
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141935.1:35284542-35284561
TGCTTTTACCTTCTTTGTTGGGAACAACTT35284542CTTTAGTTCCACATTCGCCAGTACAGAATAGTCTTTGTCTTCTCCAATCT
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141958.1:33702795-33702814
TGCTTTTACCTTCTTTGTTGGGAACAACTT33702795CTTTAGTTCCACATTCGCCAGTACAGAATAGTCTTTGTCTTCTCCGATCT
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141975.1:34916985-34917004
TGCTTTTACCTTCTTTGTTGGGAACAACTT34916985CTTTAGTTCCACATTCGCCAGTACAGAATAGTCTTTGTCTTCTCCAATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGCGAATGTGGAACTAAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGCGAATGTGGAACTAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.266 | 0.257 | search_plus_done; http://172.18.8.135:50400/match?q=TGGCGAATGTGGAACTAAAG&k=0&no_gap=0&offset=0&limit=50
0.480 | 0.214 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTAGTTCCACATTCGCCA&k=0&no_gap=0&offset=0&limit=36
0.484 | 0.005 | cgi_end;

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