GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:30:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase 1-like protein mRNA, complete cds.
KC146052.1:805-828
TATGGAGGGAGCAGCAGTGTCTTATGTGGC805TGGCTTACTGTCAGTCCCAGCAATCTTTGTTAAAGCTGTGACAGACATTGTTGA
TSA: Elaeis guineensis isotig02831.Elguifruit mRNA sequence.
JO090084.1:813-836
TCAACAATGTCTGTCACAGCTTTAACAAAG813ATTGCTGGGACTGACAGTAAGCCAGCCACATAAGACACTGCTGCTCCCTCCATA
TSA: Elaeis guineensis isotig02833.Elguifruit mRNA sequence.
JO090086.1:498-521
TCAACAATGTCTGTCACAGCTTTAACAAAG498ATTGCTGGGACTGACAGTAAGCCAGCCACATAAGACACTGCTGCTCCCTCCATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGCTTACTGTCAGTCCCAGCAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGCTTACTGTCAGTCCCAGCAAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.277 | 0.268 | search_plus_done; http://172.18.8.135:50400/match?q=TGGCTTACTGTCAGTCCCAGCAAT&k=0&no_gap=0&offset=0&limit=50
0.339 | 0.063 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGCTGGGACTGACAGTAAGCCA&k=0&no_gap=0&offset=0&limit=49
0.341 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).