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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-12-17 11:51:12, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Oryza rufipogon isolate Y476 chromosome 10.
CP154951.1:9494095-9494113
ACCCCCAGAGTTTGAGTATGCGTCAGATGG9494095TGGCTTTTCTGTCACGTCCCAAAACGACTCTAAAATACATCCTCTAAAT
Alopecurus aequalis genome assembly, chromosome: 2.
OZ203537.1:224765954-224765972
CGATGTTACCCTCACTTTCATCGTCTGGCT224765954TGGCTTTTCTGTCACGTCCCACCATAGCGACAAAGTGAAGGTGTGGGTG
Caprimulgus europaeus genome assembly, chromosome: 2.
OU015524.1:74178918-74178936
GCATCAAAAACCAGATTCCATTTCTTTGAC74178918TGGCTTTTCTGTCACGTCCGACACCAAAGTGCTCTCATGTTCCAGCATT
Larus fuscus genome assembly, chromosome: 2.
OZ010754.1:164120702-164120720
AATGACACTCTGTCTAGGAACACAGACAGA164120702TGGCTTTTCTGTCACGTCCCCAGCCTTTTCAATTCTGTCCTTATCAGAT
Larus argentatus genome assembly, chromosome: 2.
OZ207354.1:168020661-168020679
AATGACACTCTGTCTAGGAACACAGACAGA168020661TGGCTTTTCTGTCACGTCCCCAGCCTTTTCAATTCTGTCCTTATCAGAT
Larus argentatus genome assembly, chromosome: 2.
OZ207387.1:167200643-167200661
AATGACACTCTGTCTAGGAACACAGACAGA167200643TGGCTTTTCTGTCACGTCCCCAGCCTTTTCAATTCTGTCCTTATCAGAT
Delphinus delphis genome assembly, chromosome: 5.
OX465330.1:3548969-3548987
TCAAGTATCAATTAAGACTCTTTCACAGTT3548969GGACGTGACAGAAAAGCCAACCCAAACTGGCTTAAAGCGAAAAGGAAAT
Taphrorychus bicolor genome assembly, chromosome: 1.
OX638297.1:12366694-12366712
CCCTGAATGCCGAGCTTCAAAATGGCGGCT12366694GGACGTGACAGAAAAGCCAATTGCCTGTAAATAGCAATATCAGCAATTT
Gallus gallus breed Huxu chromosome 1.
CP100555.1:3704947-3704965
AACCCAGACAGATGAAGTTATTTTCACTGA3704947GGACGTGACAGAAAAGCCAAAACAATGGAAGAAAACACAGCATCCACTA
Parambassis ranga genome assembly, chromosome: 8.
LR131980.1:17061881-17061899
CTCAGCACACAAATACAGGTTTAGGTGAGA17061881GGACGTGACAGAAAAGCCACAGCAGTGATTCTCATTTTTAAAATATAAA
Chroicocephalus ridibundus genome assembly, chromosome: 2.
OZ001734.1:3702068-3702086
ATCTGATAAGGACAGAATTGAAAAGGCTGG3702068GGACGTGACAGAAAAGCCATCTGTCTGTGTTCCTAGACAGAGTGTCATT
Larus michahellis genome assembly, chromosome: 2.
OZ118747.1:3978659-3978677
ATCTGATAAGGACAGAATTGAAAAGGCTGG3978659GGACGTGACAGAAAAGCCATCTGTCTGTGTTCCTAGACAGAGTGTCATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGCTTTTCTGTCACGTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGCTTTTCTGTCACGTCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.320 | 0.311 | search_plus_done; http://172.18.8.135:50800/match?q=TGGCTTTTCTGTCACGTCC&k=0&no_gap=0&offset=0&limit=50
0.438 | 0.118 | search_minus_done; http://172.18.8.135:50800/match?q=GGACGTGACAGAAAAGCCA&k=0&no_gap=0&offset=0&limit=44
0.442 | 0.004 | cgi_end;

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