GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 12:57:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Homo sapiens, clone hRPK.78_A_1, complete sequence.
AC007157.6:36574-36593
GGAGAAATTGGAACCCTTATACATTGCTGG36574TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Human DNA sequence from clone RP11-272D1 on chromosome 9.
AL442064.10:138027-138046
GGAGAAATTGGAACCCTTATACATTGCTGG138027TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Homo sapiens DNA, chromosome 9, nearly complete genome.
AP023469.1:111531142-111531161
GGAGAAATTGGAACCCTTATACATTGCTGG111531142TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Homo sapiens isolate CHM13 chromosome 9.
CP068269.2:123160350-123160369
GGAGAAATTGGAACCCTTATACATTGCTGG123160350TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Homo sapiens isolate NA24385 chromosome 9.
CP139512.1:116276985-116277004
GGAGAAATTGGAACCCTTATACATTGCTGG116276985TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Homo sapiens isolate NA24385 chromosome 9.
CP139535.1:103980804-103980823
GGAGAAATTGGAACCCTTATACATTGCTGG103980804TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Mouse DNA sequence from clone RP23-475F22 on chromosome 11.
AL669968.10:16941-16960
ACAGAAATGGAGTCACTCCTGTTCTGTCAG16941TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971554.1:63205934-63205953
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63205934TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971584.1:63264771-63264790
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63264771TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971605.1:63521133-63521152
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63521133TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus domesticus genome assembly, chromosome: 11.
OW971617.1:63400724-63400743
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63400724TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971647.1:63460193-63460212
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63460193TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus molossinus genome assembly, chromosome: 11.
OW971670.1:63857719-63857738
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63857719TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus spretus genome assembly, chromosome: 11.
OW971689.1:64115190-64115209
ACAGAAATGGAGTCACTCCTGTTCTGTCAG64115190TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTTCTTA
Mus musculus genome assembly, chromosome: 11.
OW971701.1:63359647-63359666
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63359647TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971731.1:63373764-63373783
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63373764TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971752.1:63405573-63405592
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63405573TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus musculus genome assembly, chromosome: 11.
OW971773.1:63379323-63379342
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63379323TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971794.1:63477116-63477135
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63477116TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971816.1:63458927-63458946
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63458927TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus castaneus genome assembly, chromosome: 11.
OW971827.1:62963364-62963383
ACAGAAATGGAGTCACTCCTGTTCTGTCAG62963364TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OW971847.1:63421963-63421982
ACAGAAATGGAGTCACTCCTGTTCTGTCAG63421963TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OX389805.1:66775491-66775510
ACAGAAATGGAGTCACTCCTGTTCTGTCAG66775491TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OX390157.1:64584215-64584234
ACAGAAATGGAGTCACTCCTGTTCTGTCAG64584215TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Mus musculus genome assembly, chromosome: 11.
OX439024.1:74110893-74110912
ACAGAAATGGAGTCACTCCTGTTCTGTCAG74110893TGGGAATATAAAAGGTGCAGCCATTCTGGAAAACTCTGTCTGTTTCTTAG
Lagenorhynchus albirostris genome assembly, chromosome: 3.
OX459074.1:125687268-125687287
TGGAGAAATTAGAACCTTGCGCACTATGGG125687268TGGGAATATAAAAGGTGCAGCCCCTGTGGAAAACGGTATGGAGATTCCTT
Sylvilagus floridanus genome assembly, chromosome: 7.
OX463229.1:76623248-76623267
TCACTTACCTACTATATTGGGGGATCTGCA76623248TGGGAATATAAAAGGTGCAGTTCACCAAGCTCTTCCTTCCCCTGTATCAG
Balaenoptera acutorostrata genome assembly, chromosome: 2.
OX465351.1:134674034-134674053
TGGAGAAATTAGAAACTTGGGCACTATGGG134674034TGGGAATATAAAAGGTGCAGCCACTGTGGAAAACAGTATGGAGATTCCTT
Phocoena phocoena genome assembly, chromosome: 3.
OZ004759.1:126742030-126742049
TGGAGAAATTAGAACCTTGCGCACTATGGG126742030TGGGAATATAAAAGGTGCAGCCGCTGTGGAAAACGGTATGGAGATTCCTT
Sequence 278 from Patent EP2257298.
HI937371.1:185468-185487
GGAGAAATTGGAACCCTTATACATTGCTGG185468TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2011517281-A/198: GENETIC POLYMORPHISMS ASSOCIATED WITH STROKE, METHODS OF DETECTION AND USES THEREOF.
HV493073.1:185468-185487
GGAGAAATTGGAACCCTTATACATTGCTGG185468TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2013524810-A/213: GENETIC POLYMORPHISMS ASSOCIATED WITH STATIN RESPONSE AND CARDIOVASCULAR DISEASES, METHODS OF DETECTION AND USES THEREOF.
HW303466.1:124917-124936
GGAGAAATTGGAACCCTTATACATTGCTGG124917TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2014097071-A/198: GENETIC POLYMORPHISMS ASSOCIATED WITH STROKE, METHODS OF DETECTION AND USES THEREOF.
HZ764943.1:185468-185487
GGAGAAATTGGAACCCTTATACATTGCTGG185468TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2016029952-A/213: GENETIC POLYMORPHISMS ASSOCIATED WITH STATIN RESPONSE AND CARDIOVASCULAR DISEASES, METHODS OF DETECTION AND USES THEREOF.
LX260407.1:124917-124936
GGAGAAATTGGAACCCTTATACATTGCTGG124917TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2016063837-A/198: GENETIC POLYMORPHISMS ASSOCIATED WITH STROKE, METHODS OF DETECTION AND USES THEREOF.
LX273974.1:185468-185487
GGAGAAATTGGAACCCTTATACATTGCTGG185468TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2016063836-A/198: GENETIC POLYMORPHISMS ASSOCIATED WITH STROKE, METHODS OF DETECTION AND USES THEREOF.
LX277008.1:185468-185487
GGAGAAATTGGAACCCTTATACATTGCTGG185468TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2017063795-A/213: GENETIC POLYMORPHISMS ASSOCIATED WITH STATIN RESPONSE AND CARDIOVASCULAR DISEASES, METHODS OF DETECTION AND USES THEREOF.
MA634862.1:124917-124936
GGAGAAATTGGAACCCTTATACATTGCTGG124917TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2017201989-A/198: GENETIC POLYMORPHISMS ASSOCIATED WITH STROKE, METHODS OF DETECTION AND USES THEREOF.
MA893781.1:185468-185487
GGAGAAATTGGAACCCTTATACATTGCTGG185468TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
JP 2018161156-A/213: GENETIC POLYMORPHISMS ASSOCIATED WITH STATIN RESPONSE AND CARDIOVASCULAR DISEASES, METHODS OF DETECTION AND USES THEREOF.
MC415967.1:124917-124936
GGAGAAATTGGAACCCTTATACATTGCTGG124917TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Sequence 264 from patent US 10563263.
MO894761.1:124917-124936
GGAGAAATTGGAACCCTTATACATTGCTGG124917TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Sequence 278 from patent US 11401555.
OO414258.1:185468-185487
GGAGAAATTGGAACCCTTATACATTGCTGG185468TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Sequence 264 from patent US 11827937.
OT862524.1:124917-124936
GGAGAAATTGGAACCCTTATACATTGCTGG124917TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Eukaryotic synthetic construct chromosome 9.
CP034508.1:113740970-113740989
GGAGAAATTGGAACCCTTATACATTGCTGG113740970TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Eukaryotic synthetic construct chromosome 9.
CP034533.1:113740970-113740989
GGAGAAATTGGAACCCTTATACATTGCTGG113740970TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Human DNA sequence *** SEQUENCING CANCELLED *** from clone RP11-370F12.
AL590646.6:144341-144360
GGAGAAATTGGAACCCTTATACATTGCTGG144341TGGGAATATAAAAGGTGCAGCCACTGTGAAAATCTGGTAGTTCCTCAAAA
Lotus japonicus genomic DNA, chromosome 6, clone: LjT34O10, TM0880.
AP010122.1:74131-74150
ATTATGCATAATAAAACAGAATCTGAAAAA74131TGGGAATATAAAAGGTGCAGTTTCTGGGTTTTGACTCTGCAACATCACAA
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:55685128-55685147
ATTATGCATAATAAAACAGAATCTGAAAAA55685128TGGGAATATAAAAGGTGCAGTTTCTGGGTTTTGACTCTGCAACATCACAA
Rhesus Macaque BAC CH250-326K20 () complete sequence.
AC193650.5:113614-113633
GAGACACCATCACACTGTCTTCCACAGTGG113614CTGCACCTTTTATATTCCCAGAAGCAATGTACGAGGGTTTCAATTTCTCC
Apodemus sylvaticus genome assembly, chromosome: 10.
OX359307.1:57545587-57545606
TGAAGACTTCCATTGTATTTCCCACGGTGG57545587CTGCACCTTTTATATTCCCACAGCAGCGGAAGAGTGTTGGGATCTCTTTG
Orcinus orca genome assembly, chromosome: 3.
OW443362.1:59406715-59406734
AAGGAATCTCCATACCGTTTTCCACAGGGG59406715CTGCACCTTTTATATTCCCACCCATAGTGCGCAAGGTTCTAATTTCTCCA
Hyperoodon ampullatus genome assembly, chromosome: 4.
OX457059.1:48864385-48864404
AAGGAATCTCCATACCGTTTTCCACAGTGT48864385CTGCACCTTTTATATTCCCACCCATAGTGAGCAAGGTTCTAATTTCTCCA
Eptesicus nilssonii genome assembly, chromosome: 15.
OX621294.1:46370706-46370725
AAATAGTTCCCATACTGTTTTCCATAGTGG46370706CTGCACCTTTTATATTCCCATCAGCCATAAATGAGGGTTCCTTTTTCTTC
JP 2009519001-A/5395: GENETIC POLYMORPHISMS ASSOCIATED WITH STENOSIS, METHODS OF DETECTION AND USES THEREOF.
DM345175.1:55468-55487
TTTTGAGGAACTACCAGATTTTCACAGTGG55468CTGCACCTTTTATATTCCCACCAGCAAYGTATAAGGGTTCCAATTTCTCC
JP 2009519001-A/17820: GENETIC POLYMORPHISMS ASSOCIATED WITH STENOSIS, METHODS OF DETECTION AND USES THEREOF.
DM357600.1:74-93
TTTTGAGGAACTACCAGATTTTCACAGTGG74CTGCACCTTTTATATTCCCACCAGCAAYGTATAAGGGTTCCAATTTCTCC
JP 2009519001-A/17950: GENETIC POLYMORPHISMS ASSOCIATED WITH STENOSIS, METHODS OF DETECTION AND USES THEREOF.
DM357730.1:42-61
TTTTGAGGAACTACCAGATTTTCACAGTGG42CTGCACCTTTTATATTCCCACCAGCAATGTATAAGGGTTCCAATTTCTCC
Podabrus alpinus genome assembly, chromosome: 6.
OW026457.1:13814339-13814358
ACATAATATAAAAGCAGGTCCTGACTCTTC13814339CTGCACCTTTTATATTCCCAACAGATAGACTTCTAATTAAATTCATCTAA
Alentia gelatinosa genome assembly, chromosome: 14.
OX465592.1:18854031-18854050
CTGACCCGCACATGTTACCGTTCAACGTCT18854031CTGCACCTTTTATATTCCCAGTCAAAAACGTCGGCAGAGATTTGCTGCGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGGAATATAAAAGGTGCAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGGAATATAAAAGGTGCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.840 | 0.831 | search_plus_done; http://172.18.8.135:50400/match?q=TGGGAATATAAAAGGTGCAG&k=0&no_gap=0&offset=0&limit=50
0.922 | 0.082 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCACCTTTTATATTCCCA&k=0&no_gap=0&offset=0&limit=3
0.929 | 0.007 | cgi_end;

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