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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:37:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Balaenoptera acutorostrata genome assembly, chromosome: 10.
OX465360.1:6532740-6532761
GACCACCAAGACTTCCCAGATAGCACCACT6532740TGGGGGTGAAAATGCAACAGAGACACTAGAGGCCAGACGCTGCCAGGGAAAA
Sequence 961 from patent US 6768041.
AR566925.1:554-575
ACAAAGCTTTACACAGAGGCAGTGAAAGGA554TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA
Sequence 962 from patent US 6768041.
AR566926.1:554-575
ACAAAGCTTTACACAGAGGCAGTGAAAGGA554TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA
Eucalyptus camaldulensis mRNA, clone: EDS008I18, 5'-EST.
FY787498.1:299-320
ACAAAGCTTTACACAGAGGCAGTGAAGGGA299TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA
Eucalyptus camaldulensis mRNA, clone: EHR002J09, 3'-EST.
FY787760.1:562-583
ACAAAGCTTTACACAGAGGCAGTGAAGGGA562TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA
Eucalyptus camaldulensis mRNA, clone: EHR004D07, 3'-EST.
FY788080.1:562-583
ACAAAGCTTTACACAGAGGCAGTGAAGGGA562TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA
Eucalyptus camaldulensis mRNA, clone: EHR004I17, 3'-EST.
FY788151.1:186-207
ACAAAGCTTTACACAGAGGCAGTGAAGGGA186TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA
Eucalyptus camaldulensis mRNA, clone: EHR007J07, 3'-EST.
FY788631.1:442-463
ACAAAGCTTTACACAGAGGCAGTGAAGGGA442TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA
Eucalyptus camaldulensis mRNA, clone: ELS005K22, 3'-EST.
FY790400.1:590-611
ACAAAGCTTTACACAGAGGCAGTGAAGGGA590TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA
Eucalyptus camaldulensis mRNA, clone: ELS005P24, 3'-EST.
FY790539.1:585-606
ACAAAGCTTTACACAGAGGCAGTGAAGGGA585TGGGGGTGAAAATGCAACAGAGCCACCATTTGGTGGCCGTGAAGTTGAATGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGGGGTGAAAATGCAACAGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGGGGTGAAAATGCAACAGAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.599 | 0.591 | search_plus_done; http://172.18.8.135:50400/match?q=TGGGGGTGAAAATGCAACAGAG&k=0&no_gap=0&offset=0&limit=50
0.621 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTGTTGCATTTTCACCCCCA&k=0&no_gap=0&offset=0&limit=40
0.622 | 0.000 | cgi_end;

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