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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:19:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-54943 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w17i4 5', mRNA sequence.
DV707280.1:202-224
ATCTGCATGTTACAGAAACTCTCCCCCAGA202TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
CGN-55461 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w10j2 5', mRNA sequence.
DV707671.1:202-224
ATCTGCATGTTACAGAAACTCTCCCCCAGA202TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
CGN-57967 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w18n11 5', mRNA sequence.
DV709618.1:202-224
ATCTGCATGTTACAGAAACTCTCCCCCAGA202TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
CR-EST294 Leaf EST Library of robusta coffee cultivar 'CxR' Coffea congensis x Coffea canephora cDNA clone C2G20R 3', mRNA sequence.
EG328909.1:69-91
ATCTGCATGTTACAGAAACTCTCCCCCAGA69TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
TransId-70505 CACAT36FL Coffea arabica cDNA clone CACAT36FL_32_P03_048.F similar to Symbol: None | ubiquitin carboxyl-terminal hydrolase family protein, similar to U4/U6.U5 tri-snRNP-associated 65 kDa
GR980973.1:42-64
ATCTGCATGTTACAGAAACTCTCCCCCAGA42TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
TransId-220374 CACATN1 Coffea arabica cDNA clone CACATN1-6D24TV similar to Putative U4/U6.U5 tri-snRNP-associated 65 kDa protein - Oryza sativa (japonica cultivar-group), mRNA sequence.
GR997040.1:312-334
ATCTGCATGTTGCAGAAACTCTCCCCCAGA312TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
TransId-218058 CACATN1 Coffea arabica cDNA clone CACATN1-5M73TV similar to Putative U4/U6.U5 tri-snRNP-associated 65 kDa protein - Oryza sativa (japonica cultivar-group), mRNA sequence.
GR998085.1:347-369
ATCTGCATGTTACAGAAACTCTCCCCCAGA347TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
CA00-XX-PC1-007-C07-EC.F Coffea arabica PC1 Coffea arabica cDNA clone CA00-XX-PC1-007-C07-EC, mRNA sequence.
GT671046.1:222-244
ATCTGCATGTTACAGAAACTCTCCCCCAGA222TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
CA00-XX-RT3-007-B01-AG.F Coffea arabica RT3 Coffea arabica cDNA clone CA00-XX-RT3-007-B01-AG, mRNA sequence.
GT692526.1:341-363
ATCTGCATGTTACAGAAACTCTCCCCCAGA341TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
CA00-XX-SH2-050-A12-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-050-A12-EM, mRNA sequence.
GW441795.1:333-355
ATCTGCATGTTACAGAAACTCTCCCCCAGA333TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
CA00-XX-SI3-038-F07-EM.F Coffea arabica SI3 Coffea arabica cDNA clone CA00-XX-SI3-038-F07-EM, mRNA sequence.
GW454899.1:456-478
ATCTGCATGTTACAGAAACTCTCCCCCAGA456TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG
CA00-XX-SI3-019-E12-EM.F Coffea arabica SI3 Coffea arabica cDNA clone CA00-XX-SI3-019-E12-EM, mRNA sequence.
GW456067.1:457-479
ATCTGCATGTTACAGAAACTCTCCCCCAGA457TGGTAGCACTGTCGGAAGCATATATGCAGATATACGAGCAGCAGCAGCAGCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGTAGCACTGTCGGAAGCATAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTAGCACTGTCGGAAGCATAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.085 | 1.076 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTAGCACTGTCGGAAGCATAT&k=0&no_gap=0&offset=0&limit=50
1.175 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=ATATGCTTCCGACAGTGCTACCA&k=0&no_gap=0&offset=0&limit=38
1.175 | 0.000 | cgi_end;

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