GGGenome | Results

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2025-04-09 02:35:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Rana temporaria genome assembly, chromosome: 11.
LR991690.1:22997217-22997236

TCAATTCCTTAGCTCAGCCCTCTCCTCTTC22997217TGGTCATTGCTGTCTGTGCTGGCCCAGCTCCTCTGCCCCTCCACAGAGCC

Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:75377470-75377489

TCTTTTAGTTTTTCCTTATTTCTCGTTTTT75377470TGGTCATTGCTGTCTGTGCTGATAGAAAACAATCAAGATATAGTAAAGTA

Terriglobus albidus strain ORNL chromosome, complete genome.
CP042806.1:2451068-2451087

ACTGGAAGCAGATCGATGCGCCAGGCGCCC2451068TGGTCATTGCTGTCTGTGCTCTGGGTAAAACCAGTGTCTGTATTGACGGC

Arachis hypogaea DNA, clone: 8iHA04J02, cultivar: YI-0311.
DE998540.1:630-649

TACTTTACTATATCTTGATTGTTTTCTATC630AGCACAGACAGCAATGACCAAAAAACGAGAAATAAGGAAAAACTAAAAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.115 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTCATTGCTGTCTGTGCT&k=0&no_gap=0&offset=0&limit=50
0.165 | 0.050 | search_minus_done; http://172.18.8.135:50400/match?q=AGCACAGACAGCAATGACCA&k=0&no_gap=0&offset=0&limit=47
0.166 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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