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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 15:58:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GC_Bc039I17.R GC_Bc Glycine canescens genomic 3', genomic survey sequence.
JS044028.1:80-99
AACTCAATCTTTCACACGTTAAGACCCACC80TGGTCGAAGAGGTCTCGTTTTGCAGTTTCTTGGAACAATCTGAGGAAGGA
Soybean clone JCVI-FLGm-23D22 unknown mRNA.
BT099291.1:853-872
CTTATATGTACAAGTTTCCTATTTAATTTC853TGGTCGAAGAGGTCTCGTTTTGCAGTTTCTTGGAACAATCTGAGGAAGGA
sc03e01.y1 Gm-c1012 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1012-1105 5', mRNA sequence.
AI900286.1:409-428
TCCTTCCTCAGATTGTTCCAAGAAACTGCA409AAACGAGACCTCTTCGACCAGGTGGGTCTTAATGTGTGAAAGATTGAGTT
sm18a11.y1 Gm-c1027 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1027-9237 5', mRNA sequence.
AW831943.1:395-414
TCCTTCCTCAGATTGTTCCAAGAAACTGCA395AAACGAGACCTCTTCGACCAGAAATTAAATAGGAAACTTGTACATATAAG
sai56c08.y1 Gm-c1068 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1068-2440 5', mRNA sequence.
BI787019.1:112-131
TCCTTCCTCAGATTGTTCCAAGAAACTGCA112AAACGAGACCTCTTCGACCAGAAATTAAATAGGAAACTTGTACATATAAG
sar54g10.y1 Gm-c1074 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1074-6451 5', mRNA sequence.
BU579164.1:101-120
TCCTTCCTCAGATTGTTCCAAGAAACTGCA101AAACGAGACCTCTTCGACCAGAAATTAAATAGGAAACTTGTACATATAAG
GLMAN16TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence.
EV269744.1:383-402
TCCTTCCTCAGATTGTTCCAAGAAACTGCA383AAACGAGACCTCTTCGACCAGAAATTAAATAGGAAACTTGTACATATAAG
GLRAK15TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK024771.1:375-394
TCCTTCCTCAGATTGTTCCAAGAAACTGCA375AAACGAGACCTCTTCGACCAGAAATTAAATAGGAAACTTGTACATATAAG
ocpsga0_0107_E04.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO016876.1:455-474
TCCTTCCTCAGATTGTTCCAAGAAACTGCA455AAACGAGACCTCTTCGACCAGAAATTAAATAGGAAACTTGTACATATAAG
ocpsga0_0197_D03.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO023842.1:386-405
TCCTTCCTCAGATTGTTCCAAGAAACTGCA386AAACGAGACCTCTTCGACCAGAAATTAAATAGGAAACTTGTACATATAAG
Glycine max cultivar Williams 82 chromosome 18.
CP126443.1:5288788-5288807
TCCTTCCTCAGATTGTTCCAAGAAACTGCA5288788AAACGAGACCTCTTCGACCAGGTGGGTCTTAATGTGTGAAAGATTGAGTT
Glycine max clone 1 phytol kinase (VTE5) mRNA, complete cds.
DQ163028.1:473-492
TCCTTCCTCAGATTGTTCCAAGAAACTGCA473AAACGAGACCTCTTCGACCAGAAATTAAATAGGAAACTTGTACATATAAG
Nezara viridula genome assembly, chromosome: 4.
OV725080.1:74886205-74886224
CCGCTGTTTCGGTCATGAACAACTGCTCGG74886205AAACGAGACCTCTTCGACCATGTATTTTCGGTGTCATGCGGAAAATCTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGTCGAAGAGGTCTCGTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTCGAAGAGGTCTCGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.300 | 0.291 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTCGAAGAGGTCTCGTTT&k=0&no_gap=0&offset=0&limit=50
0.778 | 0.478 | search_minus_done; http://172.18.8.135:50400/match?q=AAACGAGACCTCTTCGACCA&k=0&no_gap=0&offset=0&limit=48
0.786 | 0.007 | cgi_end;

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