GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:56:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Porphyra yezoensis cDNA clone:PL024c04_r, 5' end.
AV430781.1:415-434
CAGCCAAGCGGCTGTCACAGCCAAGAGCGC415TACGCCTGATAACACGACCAATGACACCACCGGTGGCGGGTTGGCGGGCG
Porphyra yezoensis cDNA clone:PM044a05_r, 5' end.
AV434487.1:405-424
CAGCCAAGCGGCTGTCACAGCCAAGAGCGC405TACGCCTGATAACACGACCAATGACACCACCGGTGGCGGGTTGGCGGGCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGTCGTGTTATCAGGCGTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTCGTGTTATCAGGCGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.323 | 0.314 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTCGTGTTATCAGGCGTA&k=0&no_gap=0&offset=0&limit=50
0.390 | 0.067 | search_minus_done; http://172.18.8.135:50400/match?q=TACGCCTGATAACACGACCA&k=0&no_gap=0&offset=0&limit=50
0.392 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).