GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-31 22:51:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

vsu-ars_014667_LI10Contig_8611 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO789634.1:309-329
GTTTTTCATTTCATCATCTGATGTATATTT309TGGTCTGTCTGTTGATCTCCATATACTAAAACCAGGGTGATTAAATTTGTC
vsu-ars_021602_LI15contig_1916 VSU-ARS-L15 Phaseolus acutifolius cDNA, mRNA sequence.
HO796569.1:684-704
GTTTTTCATTTCATCATCTGATGTATATTT684TGGTCTGTCTGTTGATCTCCATATACTAAAACCAGGGTGATTAAATTTGTC
10PANVN0_T7_016_F05_15APR2006_037 10PANVN0 Phaseolus angustissimus cDNA, mRNA sequence.
FD798586.1:84-104
GACAAATTTAATCACCCTGGTTTTAGTATA84TGGAGATCAACAGACAGACCAAAATATACATCAGATGATGAAATGAAAAAC
Vigna angularis mRNA, clone: VES08K22.
HX945356.1:43-63
GACAAATTTAATCACCCTGGTTTTTGTATA43TGGAGATCAACAGACAGACCAAAATATACATCAGATGATAAAATGAAAAAA
Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
AP015040.1:10674385-10674405
GACAAATTTAATCACCCTGGTTTTTGTATA10674385TGGAGATCAACAGACAGACCAAAATATACATCAGATGATAAAATGAAAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGTCTGTCTGTTGATCTCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTCTGTCTGTTGATCTCCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.278 | 0.270 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTCTGTCTGTTGATCTCCA&k=0&no_gap=0&offset=0&limit=50
0.477 | 0.199 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGATCAACAGACAGACCA&k=0&no_gap=0&offset=0&limit=48
0.479 | 0.002 | cgi_end;

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