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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:29:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cervus elaphus genome assembly, chromosome: 12.
OU343089.1:15900862-15900882
GCAGCCTCAGGAATTGATGGTGATGGTTGA15900862TGGTGATGATGGTGGTAGTCATGGCAACAGCATACGCTTATGTACTAGGCA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 5.
OX596089.1:15586791-15586811
GCAGCCTCAGGAATTGATGGTGATGGTTGA15586791TGGTGATGATGGTGGTAGTCATGGCAACAGCATACTCTTATGTACTAGGTA
Muntiacus reevesi genome assembly, chromosome: 1.
OZ005624.1:49997709-49997729
GTGATGGTGATGATGATGGTGGTGATGATA49997709TGGTGATGATGGTGGTAGTCATGATGGTGGTGATGGTGGTAGTGATGATAA
Vitis vinifera, whole genome shotgun sequence, contig VV78X175356.9, clone ENTAV 115.
AM455668.1:14741-14761
GCGGTGATGGAATTGTATGGTGGTGGTGAA14741TGGTGATGATGGTGGTAGTCATACTGATTGTGCAGTTATGGCATGGCAGCA
Vitis rotundifolia cultivar Noble chromosome 18.
CP092943.1:2992901-2992921
TGGTGGTGGTGAATGGTGATAATACTAGAC2992901TGGTGATGATGGTGGTAGTCATACTGATTGTGCAGTTATGTCATGGCAGCA
Vitis vinifera cultivar Pinot Noir 40024 chromosome 18.
CP126665.1:3175362-3175382
TGGTGGTGGTGAATGGTGATAATACTAGAC3175362TGGTGATGATGGTGGTAGTCATACTGATTGTGCAGTTATGTCATGGCAGCA
Vitis vinifera cv. PN40024, annotated scaffold_1.assembly12x.
FN595227.1:2085393-2085413
TGGTGGTGGTGAATGGTGATAATACTAGAC2085393TGGTGATGATGGTGGTAGTCATACTGATTGTGCAGTTATGTCATGGCAGCA
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:161600925-161600945
GCAATATGGAGATGGTGATGAGGGTGCTGA161600925TGGTGATGATGGTGGTAGTCATGATGATGATCCCGATGAAGTCCAGCTTGA
Cornus suecica genome assembly, chromosome: 2.
OY998239.1:17199559-17199579
TAGCGATAATGGTGGAAAGTGGTGATATGG17199559TGGTGATGATGGTGGTAGTCAGGTGATGCTGGTGTATTGGTAGAATACATT
Bombyx mori Nichi01 DNA, chromosome 9, complete sequence.
AP026190.1:2177850-2177870
ATAGCTTTGACTGTATAAATCATATCGGGA2177850TGGTGATGATGGTGGTAGTCACTATTCATGAAAATTAGTAATGCCAAAAGA
Bombyx mori p50T DNA, chromosome 09, sequence.
AP028179.1:2143864-2143884
ATAGCTTTGACTGTATAAATCATATCGGGA2143864TGGTGATGATGGTGGTAGTCACTATTCATGAAAATTAGTAATGCCAAAAGA
Bombyx mandarina Sakado DNA, chromosome 09, sequence.
AP028291.1:2213719-2213739
TAGCTTTGACTGTATAAGATCATATCGGGA2213719TGGTGATGATGGTGGTAGTCACTATTCATGAAAATTAGTAATGCCAAAAGA
Mya arenaria isolate MELC-2E11 chromosome 7.
CP111018.1:39346584-39346604
TGGTAGTCATTATTGTGATGAGCACTGTGG39346584TGGTGATGATGGTGGTAGTCATAATTGTGATAAGCACAGAAGGGTCGGTAT
Mya arenaria isolate MELC-2E11 chromosome 9.
CP111020.1:35331791-35331811
TGATAGTCATTAATGTGATGAGCACTGTGG35331791TGGTGATGATGGTGGTAGTCATGATTGCGATAAGCACAGAAGAGGTGGTAT
Bombyx mori strain P50T chromosome 9.
CP114815.1:2143339-2143359
ATAGCTTTGACTGTATAAATCATATCGGGA2143339TGGTGATGATGGTGGTAGTCACTATTCATGAAAATTAGTAATGCCAAAAGA
Bombyx mori strain D9LxN4 chromosome 9.
CP114929.1:2150326-2150346
ATAGCTTTGACTGTATAAATCATATCGGGA2150326TGGTGATGATGGTGGTAGTCACTATTCATGAAAATTAGTAATGCCAAAAGA
Bombyx mori strain D9L chromosome 9.
CP114967.1:2143318-2143338
ATAGCTTTGACTGTATAAATCATATCGGGA2143318TGGTGATGATGGTGGTAGTCACTATTCATGAAAATTAGTAATGCCAAAAGA
4_Tbi_b3v08.
OD571030.1:19870-19890
TGGACCCGGCCACAGGCTGGAAACAGTTGA19870TGGTGATGATGGTGGTAGTCAAGTATTATAATAATATTATACCCTTACATG
Nematopogon swammerdamellus genome assembly, chromosome: 15.
OX336348.1:12580079-12580099
TCAATTTTCAACACCACGACTTGACGGTGG12580079TGGTGATGATGGTGGTAGTCATTATGTATATGTATGTATATATTCTTTATT
Octopus vulgaris genome assembly, chromosome: 23.
OX597836.1:12102256-12102276
GGTGGTGGTGGTGGTGGATAGTGGTGGTGG12102256TGGTGATGATGGTGGTAGTCATGATGGTGGTAGTCATGATGGTGATGGTGG
Chorisops tibialis genome assembly, chromosome: 2.
OY770263.1:41193107-41193127
ATTTTTCCTATACGAAGAGATTATTCTTGG41193107TGGTGATGATGGTGGTAGTCAAAGGAAAAAATAATCTTTGATGATGGTGAT
Cepaea hortensis genome assembly, chromosome: 2.
OY992877.1:61316161-61316181
TGGTGGTGGTGATGATGGTGGTGATGATGG61316161TGGTGATGATGGTGGTAGTCATGGAGGCGTTGCTGCTGCTGGCAGTGCTCG
Sciurus carolinensis genome assembly, chromosome: 11.
LR738600.1:13819344-13819364
CCCACCCCCACCACCATCATTCCATCACCA13819344TGACTACCACCATCATCACCATCCCTACCATCATCACCATCGCTACCACCA
Sciurus carolinensis genome assembly, chromosome: 11.
LR738600.1:13819531-13819551
ACTACCACCACCACCATCATCCCATCACCA13819531TGACTACCACCATCATCACCATCACCACCATCATCAGCATCATCACCATCC
Onychomys leucogaster genome assembly, chromosome: 8.
OX460378.1:89131778-89131798
TAAACCTCCCAGGAGTGATGGAAGTCACTA89131778TGACTACCACCATCATCACCACCACCACCACCACCACTACCACCACCACCA
Onychomys leucogaster genome assembly, chromosome: 8.
OX460425.1:89993515-89993535
TAAACCTCCCAGGAGTGATGGAAGTCACTA89993515TGACTACCACCATCATCACCACTACCACCACCACCACCACCACCACCACCA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 6.
OX459942.2:85171867-85171887
TACCTAGTACATAAGAGTATGCTGTTGCCA85171867TGACTACCACCATCATCACCATCAACCATCACCATCAATTCCTGAGGCTGC
Muntiacus reevesi genome assembly, chromosome: 7.
OZ005631.1:83427607-83427627
TACCTAGTACATAAGAGTATGCCGTCACCA83427607TGACTACCACCATCATCACCATCAACTATCACCATCAATTCCTGAGGCTGC
Danio aesculapii genome assembly, chromosome: 3.
LR812517.1:31604215-31604235
GATGTTCACTTCTGCACACATCCAGAATAC31604215TGACTACCACCATCATCACCAAGACATTTTAATAGGTGCTTCATAGATAAT
Rattus norvegicus clone CH230-25P16, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC133774.3:87904-87924
CAGATCCTGTAATATTTAGGAACACACACA87904TGACTACCACCATCATCACCACCACCACCATTACCACCACCATCATCATCA
Rattus norvegicus clone CH230-54G18, *** SEQUENCING IN PROGRESS ***, 66 unordered pieces.
AC136249.1:93809-93829
CAGATCCTGTAATATTTAGGAACACACACA93809TGACTACCACCATCATCACCACCACCACCATTACCACCACCATCATCATCA
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:3012052-3012072
TCCCCCTTCTTTTACCGAGAAGGGATGATA3012052TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:2800231-2800251
TCCCCCTTCTTTTACCGAGAAGGGATGATA2800231TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141985.1:3329085-3329105
TCCCCCTTCTTTTACCGAGAAGGGATGATA3329085TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:3046938-3046958
TCCCCCTTCTTTTACCGAGAAGGGATGATA3046938TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:2848217-2848237
TCCCCCTTCTTTTACCGAGAAGGGATGATA2848217TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus domestica genome assembly, chromosome: 16.
OU696692.1:3035513-3035533
TCCCCCTTCTTTTACCGAGAAGGGATGATA3035513TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus domestica genome assembly, chromosome: 16.
OU744557.1:3038646-3038666
TCCCCCTTCTTTTACCGAGAAGGGATGATA3038646TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus domestica genome assembly, chromosome: 16.
OU744968.1:3030293-3030313
TCCCCCTTCTTTTACCGAGAAGGGATGATA3030293TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus domestica genome assembly, chromosome: 16.
OU745006.1:3048872-3048892
TCCCCCTTCTTTTACCGAGAAGGGATGATA3048872TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Malus x robusta genome assembly, chromosome: 3.
OY720327.1:3415460-3415480
TCCCCCTTCTTTTACCGAGAAGGGATGATA3415460TGACTACCACCATCATCACCAAATTATCATGGTTGTTGTTAGGTGGAATCA
Crataegus laevigata genome assembly, chromosome: 11.
OY756948.1:3054868-3054888
TCCCCCTTCTTTTACCGAGAAGGGATGATA3054868TGACTACCACCATCATCACCAAATTATCATAGTTATTGTTAGGTGGAATCA
Mya arenaria isolate MELC-2E11 chromosome 13.
CP111024.1:36601470-36601490
ATACCAACTCTTCTGTGCTTAACACAATCA36601470TGACTACCACCATCATCACCACCACAGTGCTCATCACCATAATGACTACCA
Mya arenaria isolate MELC-2E11 chromosome 16.
CP111027.1:32685243-32685263
CACATATCACTTCTGTGCTTAACACAATCA32685243TGACTACCACCATCATCACCACCACAGTGCTCATCACCATATTGACTCCTG
Mya arenaria isolate MELC-2E11 chromosome 16.
CP111027.1:34935786-34935806
CACATACCACTTCTGTGCTTAACACAATCA34935786TGACTACCACCATCATCACCACCACAGTGCTCATCACCATATTGACTCCTG
4_Tte_b3v08.
OE035662.1:732-752
CATGTAAGGGTATAATATTATTATAATACT732TGACTACCACCATCATCACCATCAACTGTTTCCAGCCTGTGGCCGGGTCCA
Anopheles maculipalpis genome assembly, chromosome: 2.
OX030895.1:47805571-47805591
ATCTTTGCCCTCCAGATGTACCTCCGCACA47805571TGACTACCACCATCATCACCATCATCATCACCACCATCATCACCACACGAG
Branchellion lobata genome assembly, chromosome: 17.
OX387262.1:3795041-3795061
CCATCACCACTACCATCATCACCATCACCA3795041TGACTACCACCATCATCACCATCACCATCACCATGACTACCACCACCATCA
Branchellion lobata genome assembly, chromosome: 17.
OX387262.1:3795101-3795121
CCATGACTACCACCACCATCACCATCACCA3795101TGACTACCACCATCATCACCACCACCACCACGCAACATCACGCACGTGACC
Chalcosyrphus nemorum genome assembly, chromosome: 4.
OX454335.1:50965849-50965869
GATGATGAGGAGGAGGACTTGCATCCTCTG50965849TGACTACCACCATCATCACCATCTGCTGCTGCCGCCCTATTGGCAGTCATT
Octopus vulgaris genome assembly, chromosome: 12.
OX597825.1:9686952-9686972
CGGATTCGAGACTAAACAACAATAACAAAA9686952TGACTACCACCATCATCACCATAATTATCATCACCAACAGCAAAACCAATG
Octopus vulgaris genome assembly, chromosome: 24.
OX597837.1:38788127-38788147
CCACCAACACCACCACCAATACAACCACCA38788127TGACTACCACCATCATCACCACCAACAACAACACCATCAACATCACCAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGTGATGATGGTGGTAGTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTGATGATGGTGGTAGTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.246 | 0.237 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTGATGATGGTGGTAGTCA&k=0&no_gap=0&offset=0&limit=50
0.372 | 0.126 | search_minus_done; http://172.18.8.135:50400/match?q=TGACTACCACCATCATCACCA&k=0&no_gap=0&offset=0&limit=28
0.392 | 0.020 | cgi_end;

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