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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 08:52:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Anas platyrhynchos genome assembly, chromosome: 4.
LS423614.1:73193359-73193378
GGAGATGTGGAGCAGCGCAGAGCTCACCTC73193359TGGTGGTCTCAGGTCTGCAGCAGGCAGGGAGAGCTCTGGACTCGAGGCAA
Brassica oleracea var. viridis mRNA, clone: KALE-003O12, 5' end sequence.
DK457055.1:123-142
TACCATCTATGAAGTTGATGCCCTCCACAC123TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
Brassica oleracea var. viridis mRNA, clone: KALE-036F24, 5' end sequence.
DK469453.1:123-142
TACCATCTATGAAGTTGATGCCCTCCACAC123TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
Brassica oleracea var. viridis mRNA, clone: KALE-037E06, 5' end sequence.
DK469794.1:545-564
TACCATCTATGAAGTTGATGCCCTCCACAC545TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
Brassica oleracea var. viridis mRNA, clone: KALE-074I03, 5' end sequence.
DK484037.1:123-142
TACCATCTATGAAGTTGATGCCCTCCACAC123TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
Brassica oleracea var. viridis mRNA, clone: KALE-153K02, 5' end sequence.
DK514289.1:123-142
TACCATCTATGAAGTTGATGCCCTCCACAC123TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
48RDOAM_UP_015_D03_14AUG2004_025 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
DY014715.1:186-205
TACCATCTATGAAGTTGATGACCTCCACAC186TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
48RDOAM_UP_025_H10_14AUG2004_066 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
DY015555.1:125-144
TACCATCTATGAAGTTGATGACCTCCACAC125TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
RS3AL59TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EW733171.1:130-149
TACCATCTATGAAGTTGATTCCCTCCACAC130TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAACGTTG
RS1CE28TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EX889222.1:130-149
TACCATCTATGAAGTTGATTCCCTCCACAC130TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAACGTTG
Raphanus sativus mRNA, clone: RSCL03I14, 5' end sequence.
FY434024.1:102-121
TACCATCTATGAAGTTGATTCCCTCCACAC102TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAACGTTG
a01_08ju_6d.s 08ju Brassica juncea cDNA clone a01_08ju_6d 5, mRNA sequence.
GT077634.1:85-104
TACCATCTATGAAGTTGATGCCCTCCACAC85TGGTGGTCTCAGGTCTGCAGGCTTCCTCGGCAAGATTATATCAAACGTTG
Brassica oleracea phospholipase D2 (PLD2) mRNA, complete cds.
AF090444.1:122-141
TACCATCTATGAAGTTGATGCCCTCCACAC122TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
Brassica oleracea var. capitata phospholipase D2 (PLD2) gene, complete cds.
AF113919.1:526-545
TACCATCTATGAAGTTGATGCCCTCCACAC526TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGGTATATATTATGTTAT
Brassica napus cultivar Xiang5A chromosome 13.
CP123888.1:8442631-8442650
TACCATCTATGAAGTTGATGCCCTCCACAC8442631TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGGTATATGTATATAATA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:4110653-4110672
TACCATCTATGAAGTTGATTCCCTCCACAC4110653TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGGTATATGTGTATATAT
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:4110653-4110672
TACCATCTATGAAGTTGATTCCCTCCACAC4110653TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGGTATATGTGTATATAT
Brassica oleracea var. capitata phospholipase D mRNA, complete cds.
U85482.1:171-190
TACCATCTATGAAGTTGATGCCCTCCACAC171TGGTGGTCTCAGGTCTGCAGGCTTCCTTGGCAAGATTATATCAAATGTTG
RS3AL59JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence.
EW737812.1:130-149
CAACGTTTGATATAATCTTGCCAAGGAAGC130CTGCAGACCTGAGACCACCAGTGTGGAGGGAATCAACTTCATAGATGGTA
TSA: Raphanus sativus var. sativus RNA, contig: WG3_1943.
FX657866.1:2640-2659
CAACGTTTGATATAATCTTGCCAAGGAAGC2640CTGCAGACCTGAGACCACCAGTGTGGAGGGAATCAACTTCATAGATGGTA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_1494.
FX730664.1:1745-1764
CGACGTTTGATATAATCTTGCCAAGGAAGC1745CTGCAGACCTGAGACCACCAGTGTGGAGGGAATCAACTTCATAGATGGTA
TSA: Raphanus sativus RS21066 mRNA sequence.
JT805613.1:2544-2563
CAACGTTTGATATAATCTTGCCAAGGAAGC2544CTGCAGACCTGAGACCACCAGTGTGGAGGGAATCAACTTCATAGATGGTA
BONHL29TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BONHL29, genomic survey sequence.
BZ427877.1:418-437
ATAACATAATATATACCTTGCCAAGGAAGC418CTGCAGACCTGAGACCACCAGTGTGGAGGGCATCAACTTCATAGATGGTA
Brassica napus genome assembly, chromosome: C01.
HG994365.1:44934226-44934245
TATTATATACATATACCTTGCCAAGGAAGC44934226CTGCAGACCTGAGACCACCAGTGTGGAGGGCATCAACTTCATAGATGGTA
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:43941498-43941517
ATAACATAATATATACCTTGCCAAGGAAGC43941498CTGCAGACCTGAGACCACCAGTGTGGAGGGCATCAACTTCATAGATGGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGTGGTCTCAGGTCTGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTGGTCTCAGGTCTGCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.015 | 1.007 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTGGTCTCAGGTCTGCAG&k=0&no_gap=0&offset=0&limit=50
1.195 | 0.180 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCAGACCTGAGACCACCA&k=0&no_gap=0&offset=0&limit=32
1.200 | 0.005 | cgi_end;

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