GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:30:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

BOT01-103H19TR BOT01 Brassica oleracea genomic clone BOT01-103H19, genomic survey sequence.
FI753317.1:294-313
CCGGTTTGATTCTTTATGGGCGTGCCGTTG294TGGTGGTGCCACTTTTATGAGGATTGGCCAGGATCGGAGGTCTCTGGAGA
Brassica napus genome assembly, chromosome: C02.
HG994366.1:42426514-42426533
CCGGTTTGATTCTTTATGGGCGTGCCGTTG42426514TGGTGGTGCCACTTTTATGAGGATTGGCCAGGATCGGAGGTCTCTGGAGA
Trachurus trachurus genome assembly, chromosome: 8.
LR991642.1:7965945-7965964
TTCAGGAAGTAGTCAGATCCCATCATGCTT7965945TCATAAAAGTGGCACCACCACACTGCAAAAATGTTTACGATTTAACAAAA
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:19902140-19902159
TCTCCAGAGACCTCCGATCCTGGCCAATCC19902140TCATAAAAGTGGCACCACCACAACGGCACGCCCATAAAGAATCAAACCGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGTGGTGCCACTTTTATGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTGGTGCCACTTTTATGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.182 | 0.173 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTGGTGCCACTTTTATGA&k=0&no_gap=0&offset=0&limit=50
0.293 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=TCATAAAAGTGGCACCACCA&k=0&no_gap=0&offset=0&limit=48
0.295 | 0.001 | cgi_end;

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