GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 03:48:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Bos taurus genome assembly, chromosome: 27.
LR962883.1:45238044-45238063
GCCTCATCTCACATTGAGGGGGGAATCTCA45238044TGGTGTTTCTCGAGTTCTGGCAGGAAGCTTTGTACTCCTCTCAAGTTGTG
CH240_426N19.T7 CHORI-240 Bos taurus genomic clone CH240_426N19, genomic survey sequence.
CC544439.1:381-400
GCCTCATCTCGCATTGAGGGGGGAATCACA381TGGTGTTTCTCGAGTTCTGGCAGGAAGCTTTGTACTCCTCTCAAGTTGTG
Bos taurus clone CH240-100H1, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC162355.3:117126-117145
GCCTCATCTCGCATTGAGGGGGGAATCACA117126TGGTGTTTCTCGAGTTCTGGCAGGAAGCTTTGTACTCCTCTCAAGTTGTG
Bos taurus clone CH240-17N19, WORKING DRAFT SEQUENCE, 10 unordered pieces.
AC174043.3:145879-145898
GCCTCATCTCGCATTGAGGGGGGAATCACA145879TGGTGTTTCTCGAGTTCTGGCAGGAAGCTTTGTACTCCTCTCAAGTTGTG
Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:39265221-39265240
GATGATGGATCAAAATTGAGGTTTTAATGA39265221TGGTGTTTCTCGAGTTCTGGTTTTGTTAAAATTTACGGGCACAAGTTTTT
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39347029-39347048
GATGATGGATCAAAATTGAGGTTTTAATGA39347029TGGTGTTTCTCGAGTTCTGGTTTTGTTAAAATTTACGGGCACAAGTTTTT
Bos taurus genome assembly, chromosome: 27.
LR962758.1:83517-83536
CACAACTTGAGAGGAGTACAAAGCTTCCTG83517CCAGAACTCGAGAAACACCATGTGATTCCCCCCTCAATGCGAGATGAGGC
Bos gaurus x Bos taurus genome assembly, chromosome: 27.
OX258981.1:587720-587739
CACAACTTGAGAGGAGTACAAAGCTTCCTG587720CCAGAACTCGAGAAACACCATGTGATTCCCCCCTCAATGCGAGATGAGGC
Bos taurus strain mammals genome assembly, chromosome: 27.
OX344716.1:1169952-1169971
CACAACTTGAGAGGAGTACAAAGCTTCCTG1169952CCAGAACTCGAGAAACACCATGTGATTCCCCCCTCAATGCGAGATGAGGC
Bos taurus genome assembly, chromosome: Bta27.
OY997255.1:961866-961885
CACAACTTGAGAGGAGTACAAAGCTTCCTG961866CCAGAACTCGAGAAACACCATGTGATTCCCCCCTCAATGCGAGATGAGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGTGTTTCTCGAGTTCTGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTGTTTCTCGAGTTCTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTGTTTCTCGAGTTCTGG&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGAACTCGAGAAACACCA&k=0&no_gap=0&offset=0&limit=44
0.139 | 0.003 | cgi_end;

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