GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Arvicola amphibius genome assembly, chromosome: 4.
LR862383.1:106169662-106169681

GAACCTTTTCCCCTTCTGTGATTTGGCTCC106169662TGGTTCCTTTCCTTCCTTCAGTGGCAGCTCAGATGTCATCCTTCCCAGAA

Lutra lutra genome assembly, chromosome: 6.
LR738408.1:20082842-20082861

CAAGGCAAACATGCAGAAATCAGTCACTCT20082842TGGTTCCTTTCCTTCCTTCACAACTTCGCTCTCTCTCTTCGAAGGAGATA

Delphinus delphis genome assembly, chromosome: 1.
OX465326.1:114364670-114364689

GCAAGCCATTACTTCAGTGAGAAACATCCT114364670TGGTTCCTTTCCTTCCTTCATCATTCACATCTAAATCATCAAAATATCTG

Stenella coeruleoalba genome assembly, chromosome: 1.
OX596385.1:114375858-114375877

GCAAGCCATTACTTCAGTGAGAAACATCCT114375858TGGTTCCTTTCCTTCCTTCATCATTCACATCTAAATCATCAAAATATCTG

Furcifer pardalis isolate Fpa_1 chromosome 2.
CP126891.1:119301973-119301992

CATATCACATACCAAGCCCTTTCCCCCTTG119301973TGGTTCCTTTCCTTCCTTCATGTTTTGTCAAGCTCTAAACATTTTCCATC

TSA: Arachis hypogaea CL20002Contig1.Arhy mRNA sequence.
EZ739811.1:423-442

TGAACTGATTTCAGAGTTCCATCCCCATCA423TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCCTCACACAAACACAT

TSA: Arachis hypogaea Ahy.Unigene5441 mRNA sequence.
JR546005.1:173-192

TGAACTGATTTCAGAGTTCCATCCCCATCA173TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCCTCACACAAACACAT

Arachis hypogaea DNA, clone: AHGS47I01.
DH961700.1:36-55

TGAACTGATTTCAGGGTTTCATCCCCATCA36TGGTTCCTTTCCTTCCTTCATTGTCTCCTCCCCCCCACACAAACACACAC

Arachis hypogaea DNA, clone: AHGS40H01.
DH961845.1:363-382

TGAACTGATTTCAGAGTTCCATCCCTATCA363TGGTTCCTTTCCTTCCTTCATTCCCCCCCCCCCACACACACACACACACA

Arachis hypogaea DNA, clone: KIAC10O15.
DH964952.1:235-254

TGAACTGATTTCAGAGTTCCATCCCCATCA235TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCTCACACAACACACAC

Arachis hypogaea DNA, clone: KIAC10B14.
DH965519.1:396-415

TGAACTGATTTCAGAGTTCCATCCCCATCA396TGGTTCCTTTCCTTCCTTCATTGTGCCCTTCCCCCCTTCACACAAGCGCA

Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:45987369-45987388

TGAACTGATTTCAGAGTTCCATCCCCATCA45987369TGGTTCCTTTCCTTCCTTCATTGTGCCCTTCCCCCCTTCACACAAGCGCA

Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:96503331-96503350

TGAACTGATTTCAGAGTTCCATCCCTATCA96503331TGGTTCCTTTCCTTCCTTCATTCCCCCCCCCCACACACACACACACACGA

Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:130793915-130793934

TGAACTGATTTCAGAGTTCCATCCCCATCA130793915TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCCTCACACAAACACAT

Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:46767158-46767177

TGAACTGATTTCAGAGTTCCATCCCCATCA46767158TGGTTCCTTTCCTTCCTTCATTGTGCCCTTCCCCCCTTCACACAAGCGCA

Arachis ipaensis cultivar K30076 chromosome 02.
CP049893.1:95769361-95769380

TGAACTGATTTCAGAGTTCCATCCCTATCA95769361TGGTTCCTTTCCTTCCTTCATTCCCCCCCCCCCCACACACACACACACAC

Triticum aestivum genome assembly, chromosome: 4B.
LR862518.1:494897506-494897525

CCTATGTGCGCACATCACGCTGCATCGGTG494897506TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR862539.1:487998064-487998083

CCTATGTGCGCACATCACGCTGCATCGGTG487998064TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR862560.1:496591999-496592018

CCTATGTGCGCACATCACGCTGCATCGGTG496591999TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR865468.1:493334717-493334736

CCTATGTGCGCACATCACGCTGCATCGGTG493334717TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR865489.1:490040675-490040694

CCTATGTGCGCACATCACGCTGCATCGGTG490040675TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR865510.1:488927664-488927683

CCTATGTGCGCACATCACGCTGCATCGGTG488927664TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR865749.1:514750452-514750471

CCTATGTGCGCACATCACGCTGCATCGGTG514750452TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR865770.1:488081085-488081104

CCTATGTGCGCACATCACGCTGCATCGGTG488081085TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR877319.1:507831565-507831584

CCTATGTGCGCACATCACGCTGCATCGGTG507831565TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LR878445.1:492435641-492435660

CCTATGTGCGCACATCACGCTGCATCGGTG492435641TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
LS992090.1:495026143-495026162

CCTATGTGCGCACATCACGCTGCATCGGTG495026143TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum turgidum subsp. durum genome assembly, chromosome: 4B.
LT934118.1:499054752-499054771

CCTATGTGCGCACATCACGCTGCATCGGTG499054752TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Glycyrrhiza inflata isolate NCNPR21962d FLORICAULA/LEAFY (LFY) gene, intron 2 and partial cds.
MT362025.1:105-124

AAACCAGTGTCAGGGTTGTGTAGTGGATAG105TGGTTCCTTTCCTTCCTTCAGGATCACGAACCGTTTGGATAATATTGTGT

Triticum aestivum genome assembly, chromosome: 4B.
OU015731.1:508951504-508951523

CCTATGTGCGCACATCACGCTGCATCGGTG508951504TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
OU343179.1:515676506-515676525

CCTATGTGCGCACATCACGCTGCATCGGTG515676506TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
OU963882.1:501399324-501399343

CCTATGTGCGCACATCACGCTGCATCGGTG501399324TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
OV100747.1:495102489-495102508

CCTATGTGCGCACATCACGCTGCATCGGTG495102489TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
OW530320.1:495102489-495102508

CCTATGTGCGCACATCACGCTGCATCGGTG495102489TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Triticum aestivum genome assembly, chromosome: 4B.
OX637235.1:431276388-431276407

CCTATGTGCGCACATCACGCTGCATCGGTG431276388TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT

Apamea anceps genome assembly, chromosome: Z.
OX637500.1:17005274-17005293

AATTTTAATCGTGAAGGAAAGGAACCGCTC17005274TGGTTCCTTTCCTTCCTTCACGATTAAAATGAAAAAGAGCAAGATACCTA

Eilema griseolum genome assembly, chromosome: 6.
OY759235.1:5449581-5449600

TCAATCAATTAGCCTATTTCAATCCACTGT5449581TGGTTCCTTTCCTTCCTTCATTTTTCTTTTTACTTTATCTGGAGCTAAAT

Phaonia tiefii genome assembly, chromosome: 1.
OZ008367.1:331572044-331572063

TATGTCCAATAATCACTTTGTTCCTAAGTA331572044TGGTTCCTTTCCTTCCTTCATTGGAAATATAACAATAATTTACCCAGTCC

Acomys kempi genome assembly, chromosome: 11.
OU015365.1:518967-518986

CTCTGGGAAGGATGACATCTGAGCCGCTGG518967TGAAGGAAGGAAAGGAACCAGAGCTGAGCACAGGAGGAGAAAGGTTGGAA

Acomys dimidiatus genome assembly, chromosome: 12.
OU015385.1:1335196-1335215

CTCTGGGAAGGATGACATCTGAGCCGCTGG1335196TGAAGGAAGGAAAGGAACCAGAGCTGAGCACAGGAGGAGAAAGGTTGGAG

Acomys dimidiatus genome assembly, chromosome: 12.
OU015385.1:7764161-7764180

CTCTGGGAAGGATGACATCTGAGCCGCTGG7764161TGAAGGAAGGAAAGGAACCAGAGCTGAGCACAGGAGGAGAAAGGTTGGAG

Acomys percivali genome assembly, chromosome: 11.
OU015752.1:476114-476133

CTCTGGGAAGGATGACATCTGAGCTGCTGG476114TGAAGGAAGGAAAGGAACCAGAGCTGAGCACAGAAGGAGAAAGGTTGGAA

Apodemus sylvaticus genome assembly, chromosome: 18.
OX359315.1:65279633-65279652

ATGCCTTTCCTTGTAAGAGGGAAGACAGGA65279633TGAAGGAAGGAAAGGAACCAGGGCTGTTCTAGTCATTCAGGGCTTGTGGA

Chionomys nivalis genome assembly, chromosome: 17.
OX465465.1:15917507-15917526

TTCTGCATCTTAAAATGTGCACATTCAATC15917507TGAAGGAAGGAAAGGAACCAGAGAGGGAAACAACTGACATGGAAGAAGCC

Meles meles genome assembly, chromosome: 5.
OV277445.1:134294860-134294879

TATCTCCTTTGAAGAGAGAGAGTGAAGGTG134294860TGAAGGAAGGAAAGGAACCAAGAGTGACTGATTTCTGCATGTTTTGAGCT

Arachis hypogaea DNA, clone: KIAC06M09.
DH965144.1:617-636

GTGTGTGTTGTGTGAGGGGGAAGGGGACAA617TGAAGGAAGGAAAGGAACCATGATGGGGATGGAACTCTGAAATCAGTTCA

Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:59578256-59578275

GTATGTGTATGTGAGGGTGAAGGGGGTCAA59578256TGAAGGAAGGAAAGGAACCATGATGTAGATGGTACTCTGAAAACAGTTCA

Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:20870072-20870091

GTGTGTGTTTGTGTGGGGGGGAGGAGACAA20870072TGAAGGAAGGAAAGGAACCATGATGGGGATGAAACCCTGAAATCAGTTCA

Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:94571894-94571913

GTGTGTGTTGTGTGAGGGGGAAGGGGACAA94571894TGAAGGAAGGAAAGGAACCATGATGGGGATGGAACTCTGAAATCAGTTCA

Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:142311759-142311778

ATGTGTTTGTGTGAGGGGGGAAGGGGACAA142311759TGAAGGAAGGAAAGGAACCATGATGGGGATGGAACTCTGAAATCAGTTCA

Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:93928360-93928379

GTGTGTGTTGTGTGAGGGGGAAGGGGACAA93928360TGAAGGAAGGAAAGGAACCATGATGGGGATGGAACTCTGAAATCAGTTCA

Microcos paniculata chromosome 1b.
CP131447.1:2519403-2519422

TAGGCAATGCATAATCGGTGTGATGAAGGG2519403TGAAGGAAGGAAAGGAACCAAGGAGGAGAATCTTCAAAAGGGCCATAGGC

Microcos paniculata chromosome 1a.
CP131456.1:2593664-2593683

TAGGCAATGCATAATCGGTGTGATGAAGGG2593664TGAAGGAAGGAAAGGAACCAAGGAGGAGAATCTTCAAAAGGGCCATAGGC

Acanthosoma haemorrhoidale genome assembly, chromosome: 1.
OV884011.1:140022084-140022103

GCTTTATTAAGCTGCAGGATTGTTGATGAT140022084TGAAGGAAGGAAAGGAACCAGTTGTTAGCTTTTAAGATCGTGGTGAAAAG

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Debug Info:

0.009 | 0.009 | search_start;
0.281 | 0.272 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTTCCTTTCCTTCCTTCA&k=0&no_gap=0&offset=0&limit=50
0.370 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAGGAAGGAAAGGAACCA&k=0&no_gap=0&offset=0&limit=10
0.381 | 0.011 | cgi_end;

Summary:

Results:

Data Export:

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