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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:28:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 1697 from patent US 10766935.
MV645092.1:470-493
GAGGAGCGCTTCAAGACCGGCAAGAACCGG470TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
Sequence 1702 from patent US 10766935.
MV645097.1:451-474
GAGGAGCGCTTCAAGACCGGCAAGAACCGG451TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACGGTTCATGAGATTGA
Sequence 1762 from patent US 10766935.
MV645157.1:526-549
GAGGAGAGGTTCAAGACTGGGAAGAACAGG526TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
Sequence 1697 from patent US 11566053.
OS268571.1:470-493
GAGGAGCGCTTCAAGACCGGCAAGAACCGG470TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
Sequence 1702 from patent US 11566053.
OS268576.1:451-474
GAGGAGCGCTTCAAGACCGGCAAGAACCGG451TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACGGTTCATGAGATTGA
Sequence 1762 from patent US 11566053.
OS268636.1:526-549
GAGGAGAGGTTCAAGACTGGGAAGAACAGG526TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
atr02-4ms2-d05 Atr02 Amborella trichopoda cDNA clone atr02-4ms2-d05 5', mRNA sequence.
CK758133.1:269-292
GAGGAGAGGTTCAAGACTGGGAAGAACAGG269TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
atr02-3ms1-g12 Atr02 Amborella trichopoda cDNA clone atr02-3ms1-g12 5', mRNA sequence.
CK760385.1:264-287
GAGGAGAGGTTCAAGACTGGGAAGAACAGG264TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
EoEST0927 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-920 5' similar to ribosomal protein L27, mRNA sequence.
EL608911.1:350-373
GAGGAGCGCTTCAAGACCGGCAAGAACCGG350TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPYF00774 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 189-E9-T3.seq, mRNA sequence.
EL681684.1:430-453
GAGGAGCGCTTCAAGACCGGCAAGAACCGG430TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPMF00660 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 122-H11-T3.seq, mRNA sequence.
EL684422.1:433-456
GAGGAGCGCTTCAAGACCGGCAAGAACCGG433TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPMF01352 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 5-B11-T3.seq, mRNA sequence.
EL685112.1:411-434
GAGGAGCGCTTCAAGACCGGCAAGAACCGG411TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPSC00738 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 188-G7-T3.seq, mRNA sequence.
EL688973.1:409-432
GAGGAGCGCTTCAAGACCGGCAAGAACCGG409TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPR00318 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE205-D2-T3.seq, mRNA sequence.
EL690288.1:448-471
GAGGAGCGCTTCAAGACCGGCAAGAACCGG448TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPR00694 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE210-F11-T3.seq, mRNA sequence.
EL690663.1:168-191
GAGGAGCGCTTCAAGACCGGCAAGAACCGG168TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPR02830 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_680.seq, mRNA sequence.
EL692789.1:434-457
GAGGAGCGCTTCAAGACCGGCAAGAACCGG434TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPR03316 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A2561.seq, mRNA sequence.
EL693269.1:334-357
GAGGAGCGCTTCAAGACCGGCAAGAACCGG334TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPR03369 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A2640A.seq, mRNA sequence.
EL693321.1:471-494
GAGGAGCGCTTCAAGACCGGCAAGAACCGG471TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
OPR03370 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A2640B.seq, mRNA sequence.
EL693322.1:470-493
GAGGAGCGCTTCAAGACCGGCAAGAACCGG470TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
EoEST1065 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-1070 5' similar to ribosomal protein L27, mRNA sequence.
EL930236.1:148-171
GAGGAGCGCTTCAAGACCGGCAAGAACCGG148TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
pOP-CNI02080_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNI02080 5', mRNA sequence.
EY403598.1:197-220
GAGGAGCGCTTCAAGACCGGCAAGAACCGG197TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
pOP-EO02263_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02263 5', mRNA sequence.
EY411114.1:428-451
TAGGAGCGCTTCAAGACCGGCAAGAACCGG428TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
pOP-EO06500_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO06500 5', mRNA sequence.
EY411795.1:440-463
GAGGAGCGCTTCAAGACCGGCAAGAACCGG440TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
pOP-EO05011_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO05011 5', mRNA sequence.
EY412983.1:440-463
GAGGAGCGCTTCAAGACCGGCAAGAACCGG440TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
Atr01b_8_E10_C010.g1 FGP Male Amborella trichopoda Amborella trichopoda cDNA clone 122KJj_J20 5', mRNA sequence.
FD426118.1:401-424
GAGGAGAGGTTCAAGACTGGGAAGAACAGG401TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
Atr02b_20_C09_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122CUZ_E18 5', mRNA sequence.
FD435766.1:206-229
GAGGAGAGGTTCAAGACTGGGAAGAACAGG206TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
Atr02b_36_C02_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122D8B_E04 5', mRNA sequence.
FD436490.1:426-449
GAGGAGAGGTTCAAGACTGGGAAGAACAGG426TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
Atr02b_135_E08_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122CYH_J15 5', mRNA sequence.
FD442164.1:152-175
GAGGAGAGGTTCAAGACTGGGAAGAACAGG152TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
Atr02b_135_H02_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122CYH_P03 5', mRNA sequence.
FD442180.1:385-408
AGGAGAGGTTCAAGAACTGGGAAGAACAGG385TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
Atr02b_141_B03_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122CSX_C05 5', mRNA sequence.
FD442537.1:394-417
GAGGAGAGGTTCAAGACTGGGAAGAACAGG394TGGTTCTTCACTAAGCTCCGCTTCTGAAGAAGTCATTTGATCTCCTTTTTGTGG
Elaeis guineensis EST, clone (6lib)_isotig14029.
LM619263.1:439-462
GAGGAGCGCTTCAAGACCGGCAAGAACCGG439TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
TSA: Elaeis guineensis EgEfMPOB00099 60S ribosomal protein L27 mRNA, complete cds, mRNA sequence.
EU284914.1:382-405
GAGGAGCGCTTCAAGACCGGCAAGAACCGG382TGGTTCTTCACTAAGCTCCGCTTCTAG
TSA: Elaeis guineensis isotig11060.Elguifruit mRNA sequence.
JO098287.1:438-461
GAGGAGCGCTTCAAGACCGGCAAGAACCGG438TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
TSA: Rhynchophorus ferrugineus contig06214.Rhfeelpa mRNA sequence.
JR473677.1:452-475
GAGGAGCGCTTCAAGACCGGCAAGAACCGG452TGGTTCTTCACTAAGCTCCGCTTCTAGACGCTTCTAGAGAGAGGTATACAGTTC
Cocos nucifera beta-ketoacyl ACP synthase isoform 2 mRNA, 3' UTR.
EU143667.1:76-99
GAGGAGCGCTTCAAGACCGGCAAGAACCGG76TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
Elaeis guineensis 60S ribosomal protein l27 (RPL27) mRNA, complete cds.
KC146064.1:447-470
GAGGAGCGCTTCAAGACCGGCAAGAACCGG447TGGTTCTTCACTAAGCTCCGCTTCTAGATAAAGGTATACAGTTCATGAGATTGA
Strongyloides venezuelensis genome assembly, scaffold: SVE_scaffold0000004.
LM524972.1:794038-794061
GAGGATAAATACAAGACTGGAAAGAACAAA794038TGGTTCTTCACTAAGCTCCGCTTCTAAACGTACTGTTCTTTTTTGTAACTCTGT
Oscheius sp. JU1382 genome assembly, chromosome: I.
OW051475.1:5136694-5136717
TTTTATTGATCCAACAAAATCAACAACTTA5136694GAAGCGGAGCTTAGTGAAGAACCACTTGTTCTTTCCGGTCTTGTAGCGTTCCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGTTCTTCACTAAGCTCCGCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTTCTTCACTAAGCTCCGCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.950 | 2.941 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTTCTTCACTAAGCTCCGCTTC&k=0&no_gap=0&offset=0&limit=50
3.000 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGCGGAGCTTAGTGAAGAACCA&k=0&no_gap=0&offset=0&limit=13
3.001 | 0.001 | cgi_end;

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