GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-19 08:09:41, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Aegilops speltoides subsp. speltoides genome assembly, chromosome: 3B.
OX082599.1:234686466-234686485
CTGTCCATGAGTATACCAGTTCTGAGGTGA234686466TGGTTTTGGCCTTTGATTTCCCCATTTGTCGGTATACCCATCTTTGGTAA
Euphrasia confusa genome assembly, chromosome: 2.
OX940950.1:4625585-4625604
TTTTTCGACGAAATCGACATGACTTGTAGA4625585TGGTTTTGGCCTTTGATTTCAGCTTCTTGTTTGGCTTTGAAACACAGACA
Euphrasia confusa genome assembly, chromosome: 5.
OX940953.1:5908242-5908261
TTTTTCGACGGAATCTGCATGACTTGTAGA5908242TGGTTTTGGCCTTTGATTTCAGCTTCTTGTTTGGCTTTGAGACACAGACA
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:236301121-236301140
CCGTCCATGAGTATGCTTGTTCTGAAATGA236301121TGGTTTTGGCCTTTGATTTCCCGTGTTGTCAGTATACTCATCTGTGGTAA
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:250502962-250502981
CCGTCCATGAGTATGTCGGTTCTGAACTGA250502962TGGTTTTGGCCTTTGATTTCCCCATGTTGTCGGTATACCCATCTGCGGTA
Rhinanthus minor genome assembly, chromosome: 6.
OZ185421.1:10351367-10351386
TCTTTCGACGAAAACGACATGACTTGTAGA10351367TGGTTTTGGCCTTTGATTTCAACTTCTTGTTCGGCTTTGAGACGCAGACA
Stegodyphus bicolor isolate Sbic_Betta_A chromosome 14.
CP160582.1:79946189-79946208
GGAAGTACTATCTTTCGTTTTTAAAAGGTT79946189TGGTTTTGGCCTTTGATTTCTCAAAAGAAAAGTTAAACTGCTTGTAGGTG
Stegodyphus dumicola isolate Sdum_Otavi_A_Nest chromosome 12.
CP160611.1:78399362-78399381
GGAAGTACTATCTCTTGTTTTTAAAAGGTT78399362TGGTTTTGGCCTTTGATTTCTCAAAAGAAAAGTTAAACTGCTTGTAGGTG
Erebia melampus genome assembly, chromosome: 12.
OZ179936.1:16170630-16170649
CAAACCACTTTCATCTTTGTCGCCAGGCTT16170630TGGTTTTGGCCTTTGATTTCTAGTTGTCTTGCCTTTGAGGATTAAAGGTG
Euthalenessa oculata genome assembly, chromosome: 6.
OZ220389.1:44297709-44297728
CAACAGACATTGTGTTTGCTCGAAAAGGTC44297709TGGTTTTGGCCTTTGATTTCTGCTCGTGTAATTTTTGGGCAGATTTTGCA
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 3B.
OX082599.1:237681922-237681941
TACCGCAGATGGGTATACCGACAACATGGG237681922GAAATCAAAGGCCAAAACCATCAGTTCAGAACCGACATACTCATGGACGG
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:246690733-246690752
TTACCAAAGATGGGTATACCGACAAATGGG246690733GAAATCAAAGGCCAAAACCATCAGCTCAGAACCGGTATACTCATGGACAG
Cornus suecica genome assembly, chromosome: 5.
OY998242.1:64249639-64249658
AAAACCACTAATCAAATATGGTTTGGTCTT64249639GAAATCAAAGGCCAAAACCAAAACCAGGCCCAAAATCACCTATCCAAACA
Tripolium pannonicum genome assembly, chromosome: 2.
OZ219251.1:63883406-63883425
CAAGGTTCCTTCGAAGAATAAGAAGAAGAA63883406GAAATCAAAGGCCAAAACCACTGTGGTTCAAGAGGTGGAAGCCGCTGAGG
Nesidiocoris tenuis Japan DNA, chromosome 15, sequence.
AP028923.1:2355177-2355196
TTCTCAATTTATCTATCATAATCCCGCTAT2355177GAAATCAAAGGCCAAAACCATCAACTTTTTTAAAAATCCAAATTGTAAAT
Stegodyphus sarasinorum isolate Ssar_Unkown_A chromosome 14.
CP160527.1:46203951-46203970
CACCTACAAGCAGTTTAACTTTTCTTTTGA46203951GAAATCAAAGGCCAAAACCAAACCTTTTAAAAACGAAAGATAGTACTTCC
Stegodyphus mimosarum isolate Smim_Weenen_A chromosome 14.
CP160532.1:180277049-180277068
CACCTACAAGCAGTTTAAGTTTTCTTTTGA180277049GAAATCAAAGGCCAAAACCAAACCTTTTAAAAACCAAAGCTAGTACTTCT
Euthalenessa oculata genome assembly, chromosome: 3.
OZ220386.1:126935472-126935491
TGCAAAATCTGTCCAAAAATTACACGAGCA126935472GAAATCAAAGGCCAAAACCAGACCTTTTCAAGCAAGCACAATGTTTGTTG
Podarcis liolepis genome assembly, chromosome: 8.
OZ218105.1:14935313-14935332
AGAATAACCCATCAATTCAAAAGAAGCTGC14935313GAAATCAAAGGCCAAAACCACGTTATTCTGCCCTTTGAGATCTGGTGCTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGTTTTGGCCTTTGATTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTTTTGGCCTTTGATTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.141 | 0.132 | search_plus_done; http://172.18.8.135:50800/match?q=TGGTTTTGGCCTTTGATTTC&k=0&no_gap=0&offset=0&limit=50
0.200 | 0.059 | search_minus_done; http://172.18.8.135:50800/match?q=GAAATCAAAGGCCAAAACCA&k=0&no_gap=0&offset=0&limit=40
0.206 | 0.006 | cgi_end;

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