GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:24:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Eutrigla gurnardus genome assembly, chromosome: 16.
OY741279.1:4579253-4579272
TGACTGATGCCCACGCAGCTCGTAGTCGTC4579253TGTAGCCTCTGTTGATGCTGTCTCTGATCTGTGTTTCCCACATCAGAAGC
TSA: Fagopyrum esculentum Unigene76503_laojing mRNA sequence.
JW728421.1:52-71
AAGCACCTTCTTCACCCACACTGCATCGTT52TGTAGCCTCTGTTGATGCTGGAGGAAGCCCATCGGAGCCCCCACACACCG
Thunnus albacares genome assembly, chromosome: 23.
OU607614.1:25296934-25296953
CAACATAAACAACAATGGCAGAGGCAGCAG25296934CAGCATCAACAGAGGCTACATCAGTAATAGGAGGTTGGACCAAAACACGT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:176165195-176165214
CCGAAACAGTAAAGCACCTGAAGCAATTAT176165195CAGCATCAACAGAGGCTACAGATTCACTGATTCAGGATTTCAGGTTTGTT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:179708374-179708393
CCGAAACAGTAAAGCACCTGAAGCAATTAT179708374CAGCATCAACAGAGGCTACAGATTCACTGATTCAGGATTTCAGGTTTGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTAGCCTCTGTTGATGCTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTAGCCTCTGTTGATGCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.357 | 0.349 | search_plus_done; http://172.18.8.135:50400/match?q=TGTAGCCTCTGTTGATGCTG&k=0&no_gap=0&offset=0&limit=50
0.466 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=CAGCATCAACAGAGGCTACA&k=0&no_gap=0&offset=0&limit=48
0.468 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).