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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 15:11:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

JP 2007049961-A/1: Method of judging harvest time of apple fruits.
DD491760.1:732-752
GGGGTCAGCAGATCTTCATGGAGCTTCAAT732TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
JP 2010226984-A/1: Prognostic method for long-shelf life of fruit in apple breeding.
FW568223.1:732-752
GGGGTCAGCAGATCTTCATGGAGCTTCAAT732TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
JP 2010226984-A/2: Prognostic method for long-shelf life of fruit in apple breeding.
FW568224.1:732-752
GGGGTCAGCAGATCTTCATGGAGCTTCAAT732TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
010625AAYA003232HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus domestica cDNA clone AAYA003232, mRNA sequence.
EB137364.1:104-124
GGGGTCAGCAGATCTTCATGGAGCTTCAAT104TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGAT
Malus x domestica MdACS3a gene for 1-aminocyclopropane-1-carboxylic acid synthase 3a, complete cds.
AB243060.2:732-752
GGGGTCAGCAGATCTTCATGGAGCTTCAAT732TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Pyrus communis 1-aminocyclopropene-1-carboxylate synthase 3a (ACS3a) gene, 5' flanking region and partial cds.
AY388990.1:899-919
GGGGTCAGCAGATCTTCATGGAGCTTCAAT899TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Pyrus communis 1-aminocyclopropane-1-carboxylate synthase 2a (DACS2a) gene, 5' flanking region and partial cds.
AY388991.1:616-636
GGGGTCAGCAGATCTTCATGGAGCTTCAAT616TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Pyrus communis 1-aminocyclopropane-1-carboxylate synthase 2b (DACS2b) gene, 5' flanking region and partial cds.
AY388992.1:937-957
GGGGTCAGCAGATCTTCATGGAGCTTCAAT937TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Pyrus communis 1-aminocyclopropene-1-carboxylate synthase 3a (ACS3a) gene, promoter region and partial cds.
AY442144.1:899-919
GGGGTCAGCAGATCTTCATGGAGCTTCAAT899TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:36873349-36873369
GGGGTCAGCAGATCTTCATGGAGCTTCTAT36873349TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:40208762-40208782
GGGGTCAGCAGATCTTCATGGAGCTTCAAT40208762TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:36179351-36179371
GGGGTCAGCAGATCTTCATGGAGCTTCAAT36179351TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:37300297-37300317
TGGGTCAGCAGATCTTCATGGAGCTTCAAT37300297TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:36518746-36518766
GGGGTCAGCAGATCTTCATGGAGCTTCTAT36518746TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:23441454-23441474
GGGGTCAGCTTATCTTCATGGAGCTTCAAT23441454TGTATGCAGCCCTAGATATCTTGCACACAAATCAGAATCTTAATCTCGGTA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:16126963-16126983
TACTGAGATTAAGATTCTGATTTGTGTGCA16126963AGATATCTAGGGCTGCATACAATTGAAGCTCCATGAAGATCTGCTGACCCC
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:15991332-15991352
TACTGAGATTAAGATTCTGATTTGTGTGCA15991332AGATATCTAGGGCTGCATACAATTGAAGCTCCATGAAGATCTGCTGACCCC
Malus domestica genome assembly, chromosome: 15.
OU696691.1:16265316-16265336
TACCGAGATTAAGATTCTGATTTGTGTGCA16265316AGATATCTAGGGCTGCATACAATTGAAGCTCCATGAAGATCTGCTGACCCC
Malus domestica genome assembly, chromosome: 15.
OU744556.1:16170939-16170959
TACCGAGATTAAGATTCTGATTTGTGTGCA16170939AGATATCTAGGGCTGCATACAATTGAAGCTCCATGAAGATCTGCTGACCCC
Malus domestica genome assembly, chromosome: 15.
OU744967.1:16237768-16237788
TACCGAGATTAAGATTCTGATTTGTGTGCA16237768AGATATCTAGGGCTGCATACAATTGAAGCTCCATGAAGATCTGCTGACCCC
Malus domestica genome assembly, chromosome: 15.
OU745005.1:16087065-16087085
TACCGAGATTAAGATTCTGATTTGTGTGCA16087065AGATATCTAGGGCTGCATACAATTGAAGCTCCATGAAGATCTGCTGACCCC
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:13098951-13098971
TACCGAGATTAAGATTCTGATTTGTGTGCA13098951AGATATCTAGGGCTGCATACAATTGAAGCTCCATGAAGATCTGCTGACCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTATGCAGCCCTAGATATCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTATGCAGCCCTAGATATCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.412 | 0.403 | search_plus_done; http://172.18.8.135:50400/match?q=TGTATGCAGCCCTAGATATCT&k=0&no_gap=0&offset=0&limit=50
0.531 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=AGATATCTAGGGCTGCATACA&k=0&no_gap=0&offset=0&limit=35
0.535 | 0.004 | cgi_end;

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