GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Onychomys arenicola genome assembly, chromosome: 22.
OX460368.1:8223384-8223401

AGAGAATCTGAATTGAGAAAATTCCTCCAT8223384TGTATTGGCCTGAAAGCAAATCTGTGGGCTATTATCTTGACTAGTGAT

Onychomys arenicola genome assembly, chromosome: 22.
OX460463.1:8629846-8629863

AGAGAATCTGAATTGAGAAAATTCCTCCAT8629846TGTATTGGCCTGAAAGCAAATCTGTGGGCTATTATCTTGACTAGTGAT

Onychomys torridus genome assembly, chromosome: 22.
OX460903.1:7813103-7813120

AGAGAATCTGAATTGAGAAAATTCCTCCAT7813103TGTATTGGCCTGAAAGCAAATCTGTGGGCTATTATCTTGACTAGTGAT

Rangifer tarandus platyrhyncus genome assembly, chromosome: 26.
OX596110.1:18730159-18730176

CCACTTGGGTAAAGTTGACATTTTATTCCA18730159TGTATTGGCCTGAAAGCAATGAGAAAAGGGGGAGGCAGATTTTGAGGA

Muntiacus reevesi genome assembly, chromosome: 21.
OZ005645.1:18478170-18478187

CCACTTGGGTAAAGTTGACATTTTATTCCC18478170TGTATTGGCCTGAAAGCAATGGGAAAAGGGGGAGGCAGATTCTGAAGA

Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:172104752-172104769

GGTGCTCACCCGCTCTCCCGCGACTTTTAC172104752TGTATTGGCCTGAAAGCAGGGGAAAGTTGTAAAGGAAAACCTCCAAAG

Rhinatrema bivittatum genome assembly, chromosome: 9.
LR584395.1:1241502-1241519

AATGCCGGTTAACAGTGCGCTCCACTGTAC1241502TGTATTGGCCTGAAAGCAAGGTAAGAGCAGCCAGGTCAGAGAGCCAAG

Rhinatrema bivittatum genome assembly, chromosome: 9.
LR584395.1:1270215-1270232

AATGCCGGTTAACAGTGCGCTCCACTGTAC1270215TGTATTGGCCTGAAAGCAAGGTAAGAGCAGCCAGGTCAGAGAGCCAAG

Rhinatrema bivittatum genome assembly, chromosome: 9.
LR584395.1:157459541-157459558

AAACAGTGCGCTCAGCTGAGTGCACTTTAC157459541TGTATTGGCCTGAAAGCAGATGACATACAGCAATTAAACAAGAAAGTG

Rhinatrema bivittatum genome assembly, chromosome: 12.
LR584398.1:34114888-34114905

AGAAGCAGGGTAACTGCGGCCGCACTTTAC34114888TGTATTGGCCTGAAAGCAAGAAGGAGCTATTTACATTTCTGAAATCTT

Streptopelia turtur genome assembly, chromosome: 3.
LR594553.2:57156409-57156426

CTCCAGTTTGAAACAACCATTTTGGTTGTT57156409TGTATTGGCCTGAAAGCATGCTTTTAAACTGGAAACAATGCTGAAATT

Streptopelia turtur genome assembly, chromosome: 3.
LR594553.2:57182076-57182093

CTCCAGTTTGAAACAACCATTTTGGTTGTT57182076TGTATTGGCCTGAAAGCATGCTTTTAAACTGGAAACAATGCTGAAATT

Scomber scombrus genome assembly, chromosome: 15.
OY829932.1:19086929-19086946

TTTTTTTTAAGAATAGTTTAATACAATGAA19086929TGTATTGGCCTGAAAGCAATAGCACAACTTGTAAGTGCAAGCTCATTG

Theobroma cacao isolate Sca6 chromosome 1.
CP139290.1:3343917-3343934

AATATGGATGAAAATTATGATGTCAAAAAA3343917TGTATTGGCCTGAAAGCAAAGCCTCGCCTAGGAGATGGACTTCTATTT

Theobroma cacao genome assembly, chromosome: I.
LT594788.1:3358386-3358403

AATATGGATGAAAATTATGATGTCAAAAAA3358386TGTATTGGCCTGAAAGCAAAGCCTAGCCTAGGAGATGGACTTCTATTT

Ajuga chamaepitys genome assembly, chromosome: 5.
OY282499.1:59991094-59991111

AATAATACAACAATACAAATTTAACTCTAC59991094TGTATTGGCCTGAAAGCAAAGATGATTTAAACTAATGCCTCAAAGCTG

Theobroma cacao genome assembly, chromosome: 1.
OY284438.1:3403320-3403337

AATATGGATGAAAATTATGATGTCAAAAAA3403320TGTATTGGCCTGAAAGCAAAGCCTCGCCTAGGAGATGGACTTCTATTT

Theobroma cacao genome assembly, chromosome: 1.
OY284448.1:3405135-3405152

AATATGGATGAAAATTATGATGTCAAAAAA3405135TGTATTGGCCTGAAAGCAAAGCCTCGCCTAGGAGATGGACTTCTATTT

Melangyna quadrimaculata genome assembly, chromosome: 3.
OX439485.1:86286731-86286748

TCTTCTTCAGCTATTGCGAGTTGTATTGGT86286731TGTATTGGCCTGAAAGCAGCACCATAGATAGCACACGAAGAAATAATT

Urbanus simplicius genome assembly, chromosome: 30.
OX453087.1:3668840-3668857

CGGACTTGAACTAAGTATTAACTTCAACCT3668840TGTATTGGCCTGAAAGCAAAATTACTTACAACTATGGTTTTTTGATTT

Othius punctulatus genome assembly, chromosome: 3.
OX638140.1:64690216-64690233

TACTTTTTCTCCGATTATCGTCAAAGTGAC64690216TGTATTGGCCTGAAAGCACACCTGAAGATACATTTTAACACCACTTCA

Cepaea hortensis genome assembly, chromosome: 18.
OY992893.1:85969699-85969716

TGGGTCGGGTTTGAGATAGGGCCATCCCAT85969699TGTATTGGCCTGAAAGCAGGGAGGGAAAGACGGTCAATCATTCCCTCA

Onychomys torridus genome assembly, chromosome: 22.
LR877209.1:449090-449107

ATCACTAGTCAAGATAATAGCCCACAGATT449090TGCTTTCAGGCCAATACAATGGAGGAATTTTCTCAATTCAGATTCTCT

Capricornis sumatraensis isolate serow.1 chromosome 1.
CP135626.1:143374543-143374560

TCCTCAAAATCTGCCTCCCCCTTTTCTCAT143374543TGCTTTCAGGCCAATACATGGAACAAAATGTCAACTTTACCCAAATGG

Cervus elaphus genome assembly, chromosome: 31.
OU343108.1:36349717-36349734

TCCTCAAAATCTGCCTCCCCCTTTTCTCAT36349717TGCTTTCAGGCCAATACATGGAATAAAATGTCAACTTTACCCAAGTGG

Rangifer tarandus platyrhyncus genome assembly, chromosome: 29.
OX459965.2:34821031-34821048

TCCTCAAAATCTGCCTCCCCCTTTTCTCAT34821031TGCTTTCAGGCCAATACATGGAATAAAATGTCAACTTTACCCAAGTGG

Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:209967745-209967762

GTAGCCTGTAGGTCATGGATAGCTGGGCAC209967745TGCTTTCAGGCCAATACAGTAAGGTCATGGCGGAAAGCAGGCACTCTG

Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:112239379-112239396

GTTATTTTGTATGGCTTAATATTCTTATCA112239379TGCTTTCAGGCCAATACAGAACGGTGCGCTCGGCCGAGCACACCATTA

Rhinatrema bivittatum genome assembly, chromosome: 8.
LR584394.1:81319677-81319694

TTATTATGTACAAGGAGCTGCACCCCTGCT81319677TGCTTTCAGGCCAATACAATAAATAAGAAGCACGGGAAAATGTGTACT

Nesoenas mayeri genome assembly, chromosome: 3.
OY720058.1:66055050-66055067

AATTTCAGCATTGTTTCCAGTTTAAAAGTA66055050TGCTTTCAGGCCAATACAAACAACCAAAATGGTTGTTTCAAACTGGAG

Chelon labrosus genome assembly, chromosome: 14.
OY741302.1:8359804-8359821

GGTGGGGGAACATAATAGGAAATTTCGGGG8359804TGCTTTCAGGCCAATACAGAGGAACATTAGGAAATTTTGCAATGTGGT

Valencia hispanica genome assembly, chromosome: 4.
OY747703.1:54635604-54635621

CCTAGCAGAGCATGACAACTTGTGAGACTG54635604TGCTTTCAGGCCAATACAGGTATTCGTATTTTAAGTGGAATTGTTTAA

Theobroma cacao genome assembly, chromosome: 1.
OY284458.1:35839439-35839456

AAATAGAAGTCCATCTCCTAGGCGAGGCTT35839439TGCTTTCAGGCCAATACATTTTTTGACATCATAATTTTCATCCATATT

Chrysotoxum bicinctum genome assembly, chromosome: 4.
OU426990.1:59530384-59530401

AGGACATGCTGCATGCTTGTATCCTTGTAC59530384TGCTTTCAGGCCAATACAAATACGGGCTATGTCCGTTGAAAATCCTTT

Thumatha senex genome assembly, chromosome: 9.
OX419733.1:13061833-13061850

TACTTTTATCACTTACGGTGTTCCATGTGG13061833TGCTTTCAGGCCAATACAAGACTGTTCATCTTCACCCTTGGGACAATC

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Debug Info:

0.009 | 0.009 | search_start;
0.140 | 0.131 | search_plus_done; http://172.18.8.135:50400/match?q=TGTATTGGCCTGAAAGCA&k=0&no_gap=0&offset=0&limit=50
0.235 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTTTCAGGCCAATACA&k=0&no_gap=0&offset=0&limit=28
0.244 | 0.009 | cgi_end;

Summary:

Results:

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