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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 09:10:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys torridus genome assembly, chromosome: 5.
LR877192.1:122478315-122478332
AAGAAAGTGTCCCCCTTTACTAAACCCCAG122478315TGTCATGCCAGACCTATGCTGTTCAAGTAAGTGGTAGGTAATGGACGT
Onychomys arenicola genome assembly, chromosome: 5.
OX460351.1:123041544-123041561
AAGAAAGTGTCCCCCTTTACTAAATCCCAG123041544TGTCATGCCAGACCTATGCTGTTCAAGTAAGTGGTAGGTAATGGACGT
Onychomys leucogaster genome assembly, chromosome: 5.
OX460375.1:124100772-124100789
AAGAAAGTGTCCCCCTTTACTAAATCCCAG124100772TGTCATGCCAGACCTATGCTGTTCAAGTAAGTGGTAGGTAACGGACGT
Onychomys leucogaster genome assembly, chromosome: 5.
OX460422.1:124538453-124538470
AAGAAAGTGTCCCCCTTTACTAAATCCCAG124538453TGTCATGCCAGACCTATGCTGTTCAAGTAAGTGGTAGGTAACGGACGT
Onychomys arenicola genome assembly, chromosome: 5.
OX460446.1:122995379-122995396
AAGAAAGTGTCCCCCTTTACTAAATCCCAG122995379TGTCATGCCAGACCTATGCTGTTCAAGTAAGTGGTAGGTAATGGACGT
Onychomys torridus genome assembly, chromosome: 5.
OX460886.1:122478315-122478332
AAGAAAGTGTCCCCCTTTACTAAACCCCAG122478315TGTCATGCCAGACCTATGCTGTTCAAGTAAGTGGTAGGTAATGGACGT
Balaenoptera acutorostrata genome assembly, chromosome: 16.
OX465366.1:5098738-5098755
AATAACAAAAGGACACTGAGAGCTGAAAGC5098738TGTCATGCCAGACCTATGCTGAGGGGTAACATCCCCCAGGAGAGTCAG
Stenella coeruleoalba genome assembly, chromosome: 16.
OX596401.1:5102942-5102959
AATAACAAAAGGACACTGAGAGCTGAAAGC5102942TGTCATGCCAGACCTATGCTGAGGGGTAACATCCCCCAGGAGAATCAG
Plecotus auritus genome assembly, chromosome: 7.
OY734028.1:150457276-150457293
GTAGAAATGTGGGAAGGCTAATGCTATATC150457276TGTCATGCCAGACCTATGACAAAGACCACAGAGAGCACTGTACCAGCT
Globicephala melas genome assembly, chromosome: 16.
OY734055.1:4850951-4850968
AATAACAAAAGGACACTGAGAGCTGAAAGC4850951TGTCATGCCAGACCTATGCTGAGGGGTAACATCCCCCAGGAGAATCAG
Phocoena phocoena genome assembly, chromosome: 16.
OZ004773.1:4915390-4915407
AACAACAAAAGGACACTGAGAGCTGAAAGC4915390TGTCATGCCAGACCTATGCTGAGGGGTAACATCCCCCAGGAGAATCAG
Erpetoichthys calabaricus genome assembly, chromosome: 3.
LR536434.2:93811816-93811833
CTAGATCAGGGGTCGGCAGCCTTTCAGTGG93811816TGTCATGCCAGACCTATGTTACAATGTTATTCTGCATGCCGACATAAT
Erpetoichthys calabaricus genome assembly, chromosome: 10.
LR536441.2:3272708-3272725
CTAAAGCAGGGGTTGGCAACCTTTCAGCAG3272708TGTCATGCCAGACCTATGTCACAATGCTATTCTGTGTGCTGACGTAAT
Triticum aestivum genome assembly, chromosome: 7B.
LR865498.1:597629955-597629972
CCGAGAGGGAAGCTGGCGTTATTGGCATTT597629955TGTCATGCCAGACCTATGCATGTATCTAGAAATTCAGGGCTCATTATC
Triticum aestivum genome assembly, chromosome: 7B.
LR865519.1:607950157-607950174
CCGAGAGGGAAGCTGGCGTTATTGGCATTT607950157TGTCATGCCAGACCTATGCATGTATCTAGAAATTCAGGGCTCATTATC
Triticum aestivum genome assembly, chromosome: 7B.
OU963891.1:604536826-604536843
CCGAGAGGGAAGCTGGCGTTATTGGCATTT604536826TGTCATGCCAGACCTATGCATGTATCTAGAAATTCAGGGCTCATTATC
Chrysotoxum bicinctum genome assembly, chromosome: 2.
OU426988.1:205175145-205175162
CACCTTATTATAATGGTGAGTGCGTTGAAC205175145TGTCATGCCAGACCTATGGATTCTCGATGCCCAGATACTTCTCTTGCA
Apodemus sylvaticus genome assembly, chromosome: 13.
OX359310.1:30387480-30387497
GAGTTATTGCTTCTCTTGGACATCTTTAAG30387480CATAGGTCTGGCATGACATCGGCCACCCAAAGATTTCCAAACAAAGTG
Orcinus orca genome assembly, chromosome: 14.
OW443374.1:85638594-85638611
CTGATTCTCCTGGGGGATGTTACCCCTCAG85638594CATAGGTCTGGCATGACAGCTTTCAGCTCTCAGTGTCCTTTTGTTATT
Lagenorhynchus albirostris genome assembly, chromosome: 16.
OX459088.1:79272257-79272274
CTGATTCTCCTGGGGGATGTTAGCCCTCAG79272257CATAGGTCTGGCATGACAGCTTTCAGCTCTCAGTGTCCTTTTGTTATT
Apteryx australis mantelli genome assembly, scaffold: scaffold47.
LK064645.1:3681152-3681169
AAACCTGTACTCTGTCCAGTCACTCTGTAG3681152CATAGGTCTGGCATGACATATGATGGCTCTCCTCTAATTCCCTTCCTC
Phalacrocorax aristotelis genome assembly, chromosome: 15.
OX451238.1:10482729-10482746
GCATGTCAGAACTATAAACATTTTCCACAT10482729CATAGGTCTGGCATGACAAAACCCTTAATTGTTTGCATTTCCTTTTAC
Conger conger genome assembly, chromosome: 10.
OY741323.1:18580351-18580368
AAGGATCTGATGAATTTTATTAAATGTGTG18580351CATAGGTCTGGCATGACATTTCTGAAGGGAGTGTGAGATTAAGGCTGA
Phalacrocorax carbo genome assembly, chromosome: 15.
OY997617.1:10499810-10499827
GCATGTCAGAACTATAAACATTTTCCACAT10499810CATAGGTCTGGCATGACAAAACTCTTAATTGTTTGCATTTCCTTTTAC
Harmothoe impar genome assembly, chromosome: 18.
OX381721.1:26985024-26985041
ATCAAGGATCCTTAAGGAGTGTATCTACCC26985024CATAGGTCTGGCATGACACATGAATGCGTCCATTGCGATTCACTTGCC
Fissipunctia ypsillon genome assembly, chromosome: 25.
OX387669.1:11567599-11567616
AACGACTATGACTGATGGATGACGCGGATA11567599CATAGGTCTGGCATGACATAGTTAATATAGTAGGAGTTTAATATTACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTCATGCCAGACCTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTCATGCCAGACCTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.226 | 0.218 | search_plus_done; http://172.18.8.135:50400/match?q=TGTCATGCCAGACCTATG&k=0&no_gap=0&offset=0&limit=50
0.355 | 0.128 | search_minus_done; http://172.18.8.135:50400/match?q=CATAGGTCTGGCATGACA&k=0&no_gap=0&offset=0&limit=33
0.360 | 0.006 | cgi_end;

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