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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:28:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys percivali genome assembly, chromosome: 16.
OU015757.1:59419110-59419128
GCCTCTTGCACCAGCTCCCCAGCTATGGCC59419110TGTCCTGGGTTTTACTTACAGAACCTCCAGTCCCCGCAGGGCACGGAAG
Orcinus orca genome assembly, chromosome: 7.
OW443367.1:114892155-114892173
GTCAGAGATTTAACATGAAGTACCAACTTG114892155TGTCCTGGGTTTTACTTACAATATTTCATCGAATTCAATAATTCAGTGA
Balaenoptera acutorostrata genome assembly, chromosome: 8.
OX465358.1:89109978-89109996
GTCAGAGATTTAACCTGAAGTACCAACTTG89109978TGTCCTGGGTTTTACTTACAATATTTCATCGAATTCAATAATTCAGTGA
Stenella coeruleoalba genome assembly, chromosome: 6.
OX596390.1:122208520-122208538
GTCAGAGATTTAAGATGAAGTACCAACTTG122208520TGTCCTGGGTTTTACTTACAATATTTCATCGAATTCAATAATTCAGTGA
Phocoena phocoena genome assembly, chromosome: 7.
OZ004764.1:109487976-109487994
GTCAGAGACTTAACATGAAGTACCAACTTG109487976TGTCCTGGGTTTTACTTACAATATTTCATCGAATCCAATAATCCAGTGA
Psittacula echo genome assembly, chromosome: 4.
OY725423.1:59996702-59996720
GATGTGTCTCTCTCTCCTAGTTGTTGAAAG59996702TGTCCTGGGTTTTACTTACACATTTTTGTAGTAAATAGTTCCTGGATAA
Acrobasis consociella genome assembly, chromosome: 1.
OY743105.1:4709600-4709618
ATTCCCAGGTTGGAAAAGACCTGTTGCAAT4709600TGTCCTGGGTTTTACTTACGTATTATAATAAAAATAATAAAGTAGTATC
Delphinus delphis genome assembly, chromosome: 7.
OX465333.1:6077038-6077056
TCACTGAATTATTGAATTCGATGAAATATT6077038GTAAGTAAAACCCAGGACACAAGTTGGTACTTCATGTTAAATCTCTGAC
Globicephala melas genome assembly, chromosome: 7.
OY734046.1:5884631-5884649
TCACTGAATTATTGAATTCGATGAAATATT5884631GTAAGTAAAACCCAGGACACAAGTTGGTACTTCATGTTAAATCTCTGAC
Rana temporaria genome assembly, chromosome: 5.
LR991684.1:41595949-41595967
CAGACAAACCTGATTTCCTTTTATGAAGAG41595949GTAAGTAAAACCCAGGACAGAGGCGTGGCTGTGGACGTGATATATTTGG
Silurus aristotelis genome assembly, chromosome: 4.
OX327756.1:5727677-5727695
TAAAGGAGACACTGATTTTATAAATGTCAA5727677GTAAGTAAAACCCAGGACACTGGCGAGGTCATAAAGGCAATAATAATAA
TSA: Trachemys scripta elegans comp121983_c0_seq1 mRNA sequence.
JW409415.1:267-285
TGCTCAAAATGCTCCCTCCAGAAGGCTGTT267GTAAGTAAAACCCAGGACATTTCTCACGGTGTTAGCTTTTCTCTGTCAA
QM0AAC3BF05FM1 CCH3 Citrus clementina genomic clone CCH3029K10, genomic survey sequence.
ET082280.1:700-718
GTGTGTGTGCGCGCACTANCAAACATCTAT700GTAAGTAAAACCCAGGACAAGTACCTCCATTGTAAAATGA
Citrus reshni microsatellite DNA, locus mCrCIR04F12.
FR692369.1:547-565
GTGTGTGTGCGCGCACTAGCAAACATCTAT547GTAAGTAAAACCCAGGACAAGT
Citrus sinensis genome assembly, chromosome: 1.
OY754318.1:13675632-13675650
GTGTGTGTGCGCGCACTGGCAAACATCTAT13675632GTAAGTAAAACCCAGGACAAGTACCTCCATTGTAAATGAAGATGCATAT
Siphonodentalium dalli isolate Sc116.8C chromosome III.
CP136063.1:173192504-173192522
TCAGGGTTTCTGCTAGGGTTAAAATGTAGG173192504GTAAGTAAAACCCAGGACAGGATGGGCCGACCATGGTTTGGTCCATCGT
Pterostichus madidus genome assembly, chromosome: 14.
OU452315.1:9201261-9201279
TCTCTCAGCAGTTCGATAGGCGCTACGTCG9201261GTAAGTAAAACCCAGGACAATGAACGGAAAATATAATAATATTATTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTCCTGGGTTTTACTTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTCCTGGGTTTTACTTAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.197 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=TGTCCTGGGTTTTACTTAC&k=0&no_gap=0&offset=0&limit=50
0.366 | 0.170 | search_minus_done; http://172.18.8.135:50400/match?q=GTAAGTAAAACCCAGGACA&k=0&no_gap=0&offset=0&limit=43
0.373 | 0.007 | cgi_end;

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