GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:17:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica napus unknown mRNA.
DQ062725.1:129-148
GCCCATGCTTATGCTTGGGATTAGCGTTGG129TGTCGCTTTCAACGTCATGTTTCCAGATTGGATGGTCACAGTACTCCTCA
Parietaria judaica genome assembly, chromosome: 12.
OX940871.1:17783247-17783266
GCCGATGCTCATGCTCGGCATCAGCATCGG17783247TGTCGCTTTCAACGTCATGTTCGCAGACTGGATGGTCACCGTTCTCCTCA
Epinotia demarniana genome assembly, chromosome: 16.
OX244275.1:2521170-2521189
CCACACAACGGGGTTAACTACTTTGTACCG2521170TGTCGCTTTCAACGTCATGTTAAATTGCCATATAAAGTTTTCAAACAAGC
Parietaria judaica genome assembly, chromosome: 8.
OX940867.1:12976662-12976681
TGAGGAGAACGGTGACCATCCAGTCAGCGA12976662ACATGACGTTGAAAGCGACACCGATGCTGATGCCGAGCATGAGCATCGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTCGCTTTCAACGTCATGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTCGCTTTCAACGTCATGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=TGTCGCTTTCAACGTCATGT&k=0&no_gap=0&offset=0&limit=50
0.113 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=ACATGACGTTGAAAGCGACA&k=0&no_gap=0&offset=0&limit=47
0.114 | 0.001 | cgi_end;

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