GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 16:55:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:262639108-262639129
GATTCCATAAGCTGCAAATTTCTGGAGGTA262639108TGTCTAAATTCTCATGGCAGTGCAATGATATGTCTAAATTCTCATGGCAGTG
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:262639138-262639159
TGTCTAAATTCTCATGGCAGTGCAATGATA262639138TGTCTAAATTCTCATGGCAGTGCAATGATAGGTACCTCAACCAGATGAGGCT
KS01064E06 KS01 Capsicum annuum cDNA, mRNA sequence.
BM064219.1:663-684
AGCCTCATCTGGTTGAGGTACCTATCATTG663CACTGCCATGAGAATTTAGACATAC
KS20013B03 KS20 Capsicum annuum cDNA, mRNA sequence.
GD094485.1:581-602
AGCCTCATCTGGTTGAGGTACCTATCATTG581CACTGCCATGAGAATTTAGACATACCTCCAGAAATTTGCAGCTTATGGAATC
TSA: Capsicum annuum CM_MegaContig_38928 mRNA sequence.
JW107153.1:196-217
AGCCTCATCTGGTTGAGGTACCTATCATTG196CACTGCCATGAGAATTTAGACATATCATTGCACTGCCATGAGAATTTAGACA
TSA: Capsicum annuum CM_MegaContig_38928 mRNA sequence.
JW107153.1:226-247
CACTGCCATGAGAATTTAGACATATCATTG226CACTGCCATGAGAATTTAGACATACCTCCAGAAATTTGCAGCTTATGGAATC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:3760506-3760527
AGCCTCATCTGGTTGAGGTACCTATCATTG3760506CACTGCCATGAGAATTTAGACATACCTCCAGAAATTTGCAGCTTATGGAATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTCTAAATTCTCATGGCAGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTCTAAATTCTCATGGCAGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=TGTCTAAATTCTCATGGCAGTG&k=0&no_gap=0&offset=0&limit=50
0.247 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=CACTGCCATGAGAATTTAGACA&k=0&no_gap=0&offset=0&limit=48
0.250 | 0.003 | cgi_end;

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