GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:37:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:16329738-16329757
TGTCTCGCCTTGCGAGTGATGTGGCCAATT16329738TGTGAACGGTGGTTTGATGTGACCCTAATTGTCAGACTTGGTTTTTCATT
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:16692565-16692584
TGTCTCGCCTTGCGAGTGATGTGGCCAATT16692565TGTGAACGGTGGTTTGATGTGACCCTAATTGTCAGACTTGGTTTTTCATT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:16514751-16514770
TGTCTCGCCTTGCGAGTGATGTGGCCAATT16514751TGTGAACGGTGGTTTGATGTGACCCTAATTGTCAGACTTGGTTTTTCATT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:16295317-16295336
TGTCTCGCCTTGCGAGTGATGTGGCCAATT16295317TGTGAACGGTGGTTTGATGTGACCCTAATTGTCAGACTTGGTTTTTCATT
Malus domestica genome assembly, chromosome: 1.
OU696677.1:13033836-13033855
TGTCTCGCCTTGCGAGTGATGTGGCCAATT13033836TGTGAACGGTGGTTTGATGTGACCCTAATTGTCAGACTTGGTTTTTCATT
Malus domestica genome assembly, chromosome: 1.
OU744542.1:16834263-16834282
TGTCTCGCCTTGCGAGTGATGTGGCCAATT16834263TGTGAACGGTGGTTTGATGTGACCCTAATTGTCAGACTTGGTTTTTCATT
Malus domestica genome assembly, chromosome: 1.
OU744953.1:16167772-16167791
TGTCTCGCCTTGCGAGTGATGTGGCCAATT16167772TGTGAACGGTGGTTTGATGTGACCCTAATTGTCAGACTTGGTTTTTCATT
Malus domestica genome assembly, chromosome: 1.
OU744991.1:13012363-13012382
TGTCTCGCCTTGCGAGTGATGTGGCCAATT13012363TGTGAACGGTGGTTTGATGTGACCCTAATTGTCAGACTTGGTTTTTCATT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:16964746-16964765
AATGAAAAACCAAGTCTGACAATTAGGGTC16964746ACATCAAACCACCGTTCACAAATTGGCCACATCACTCGCAAGGCGAGACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTGAACGGTGGTTTGATGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTGAACGGTGGTTTGATGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGAACGGTGGTTTGATGT&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=ACATCAAACCACCGTTCACA&k=0&no_gap=0&offset=0&limit=42
0.116 | 0.001 | cgi_end;

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