GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 18:23:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arvicola amphibius genome assembly, chromosome: 5.
LR862384.1:121013096-121013115
CCATTTATTTAGTTTCATGACACTGCATCA121013096TGTGACCTGTTCCTTGACACTTTCTGGGGGCGGGGAGACTAGAAACAAAA
Oryzias latipes strain HSOK chromosome 2.
CP020622.1:8025900-8025919
ATCTCCTCTGAGAACTTTGGAGCTTTTCTC8025900TGTGACCTGTTCCTTGACACTCTGAGCTTCAGCGTTCCAGACAGCCAGCA
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:56200531-56200550
CTGGTTCCGCATTTTTGAAACAGTGGTTGG56200531TGTGACCTGTTCCTTGACACAAGAAAACCAAATATGTTCCCCATCTACAC
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:55071486-55071505
CTGGTTCCGCATTTTTGAAACAGTGGTTGG55071486TGTGACCTGTTCCTTGACACAAGAAAACCAAATATGTTCCCCATCTACAC
Echeneis naucrates genome assembly, chromosome: 9.
LR584050.1:3077035-3077054
TTTCCTTTATATTAATAATCATAATAAAAA3077035GTGTCAAGGAACAGGTCACACAGCAAAAGACTTTGGACCACAAACGTCAG
Crambe crambe genome assembly, chromosome: 5.
OZ004585.1:1108139-1108158
CCCTCAAGGACTTGGAGACTCAACTTAAGA1108139GTGTCAAGGAACAGGTCACAGTTCTCAAACCTCCAAAGGTCCCTAACTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTGACCTGTTCCTTGACAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTGACCTGTTCCTTGACAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.153 | 0.145 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGACCTGTTCCTTGACAC&k=0&no_gap=0&offset=0&limit=50
0.235 | 0.082 | search_minus_done; http://172.18.8.135:50400/match?q=GTGTCAAGGAACAGGTCACA&k=0&no_gap=0&offset=0&limit=46
0.237 | 0.002 | cgi_end;

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