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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:12:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Capsicum annuum MGMT_Contig27698, mRNA sequence.
JW077942.1:490-511
AAGACCAAAACTGAAGAGGCAGAGAAAGAC490TGTGAGGAAGAAAGTGCGAAGGAATAAAAACGAAGAACCGATATTTTAAGTG
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:218786016-218786037
TACACCAAAACTGAAGAGGCAGAGAAAGAC218786016TGTGAGGAAGAAAGTGCGAAGGAATAAAAACGAAGAACCGATATTTTAAGTG
KS09075G10 KS09 Capsicum annuum cDNA, mRNA sequence.
CA517217.1:196-217
CACTTAAAATATNGGTTCTTCGTTTTTATT196CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT
KS16048D08 KS16 Capsicum annuum cDNA, mRNA sequence.
GD073952.1:172-193
CACTTAAAATATCGGTTCTTCGTTTTTATT172CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTGGT
KS18003G06 KS18 Capsicum annuum cDNA, mRNA sequence.
GD081789.1:170-191
CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT
KS18011H10 KS18 Capsicum annuum cDNA, mRNA sequence.
GD082553.1:170-191
CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT
KS18015H06 KS18 Capsicum annuum cDNA, mRNA sequence.
GD082920.1:170-191
CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT
KS18039C02 KS18 Capsicum annuum cDNA, mRNA sequence.
GD085095.1:170-191
CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT
KS18054D12 KS18 Capsicum annuum cDNA, mRNA sequence.
GD086478.1:170-191
CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT
KS18060G02 KS18 Capsicum annuum cDNA, mRNA sequence.
GD087055.1:170-191
CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT
TSA: Capsicum annuum CMCs80_70167, mRNA sequence.
JW114750.1:217-238
CACTTAAAATATCGGTTCTTCGTTTTTATT217CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:34487666-34487687
CACTTAAAATATCGGTTCTTCGTTTTTATT34487666CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTGTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTGAGGAAGAAAGTGCGAAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTGAGGAAGAAAGTGCGAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.115 | 0.106 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGAGGAAGAAAGTGCGAAGG&k=0&no_gap=0&offset=0&limit=50
0.666 | 0.551 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCGCACTTTCTTCCTCACA&k=0&no_gap=0&offset=0&limit=48
0.672 | 0.007 | cgi_end;

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